AMCG00009748


Basic Information

Item Value
gene id AMCG00009748
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45320757 ~ 45326055 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009748
ATGTCGCTTCGGGGCGGAGGGACGGTAATTGACGCCTCTGCTGCGGTCCGGAGCCCGACTTCCCGGGTGCTGCAGGACCAGTGTGAGCTGCGCGTGGCGCAGCGCAGAGAGAACCGCACCGACTACGTGATGCATTACTGGGGTGTGCGCAACGGCACAGTGGGGGACCTGCTGAGCCTGCTGGAGGAACTGGGCCTGCTGAGGGCCCGAGACATCATCCTGAGCTGTGAGTCGTCCCCCAACCTCCTCTGTCCCTCTTCCTCCCCGACCAGAGTCCTGATGCAGGGCCGTGTGCCGAAACCCGGGTTCTTCGTCCAGGGTGCTGCCCAGGCCaggccccccgccccccagccTCAAAACAGAACACGCAGACCCGAGAGAGAGGCCCCCCCCTCAGGTGACCCGGTCTCCGGGCTGTCCTGCAGCGCCCACTGCTGGCCTCTGGAGGAGGTGCTGCGCGGGACAGACAACTTCTCTGTGCGGCGCTGTGCGGGGGTGTACTGCCTGGTGTATGTGTACATGCCCAGCGGCTCCCTGCAGGACAGGCTGCACAGCAAGGGCGGTGGCACCCTCTCTTGGGCGCAGCGGGTCACTGTCCTGCTGGGCACCGCCAGGGCCGTTCActccaaCATCCTGCTGGGGGACAGGTTGGAGCCGCGCCTGGGGGACTTCGGCCTGGCGCGGTTCTGCCGGGCGGCCCCGGGGGGGGCGGGGCGGACGAGCGCCGTGGCTTGGACAAGCAAGGTGCGCGGGACCCTGGCCTACCTGCCCCCCGAGTATGTCACCGCTGGGGAGCTCAGCATCGCCATCGACACCTACAGCTACGGAGTGAAAGACCTGGTGAAAGAAGCTGatgaggtggaggaggaggagaaaggagGGCAAAAGAGTGAGAGTGGAGGAGGAGTGCAGGCGTCTGCCCCCccccctgctgaggagaaggtCAGACGGGCCGCCGCCCACATCTGGAGGAAACACCTGGACCCCCGCCTGCCCGCCCCCGCACCCCCCGGAGCCCTGGAGCTGTGTGCCCTGGCCTGCCGCTGCCTGGACAAGAGGAAAAAGAAGAGGCCGCCCATGGCACAGGTG
>TU73631
CCCCCCCAAGCAGCAGCCCCCTCCCAACCATCACTCCCTGTTTGACCCCCAGGACCAGAGTCCTGATGCAGGGCCGTGTGCCGAAACCCGGGTTCTTCGTCCAGATGCCAGGGTGCTGCCCAGGCCaggccccccgccccccagccTCAAAACAGAACACGCAGACCCGAGAGAGAGGCCCCCCCCTCAGCCCTCTGCAGGTGACCCGGTCTCCGGGCTGTCCTGCAGCGCCCACTGCTGGCCTCTGGAGGAGGTGCTGCGCGGGACAGACAACTTCTCTGTGCGGCGCTGTGTGGGCGAGGGCGGATTCGGGCAGGTGTACCACGCCACCATGAGGAGCACGGAGTACGCCGTCAAGAAGCTCAAGGAGGACTCAGACCTGGACTGGACGCTGGTGAAGGAGAGCTTCAAGACGGAGGTGGAGAAACTAACACAGTACCGGCACCCCAACATCGTGGATTTCGGGGGGTACTGCATGGAGGCGGGGGTGTACTGCCTGGTGTATGTGTACATGCCCAGCGGCTCCCTGCAGGACAGGCTGCACAGCAAGGGCGGTGGCACCCTCTCTTGGGCGCAGCGGGTCACTGTCCTGCTGGGCACCGCCAGGGCCGTTCAGTTCCTGCACTCCAGTAACCCAGCGCTCGTCCACGGGGACATCAAGAGctccaaCATCCTGCTGGGGGACAGGTTGGAGCCGCGCCTGGGGGACTTCGGCCTGGCGCGGTTCTGCCGGGCGGCCCCGGGGGGGGCGGGGCGGACGAGCGCCGTGGCTTGGACAAGCAAGGTGCGCGGGACCCTGGCCTACCTGCCCCCCGAGTATGTCACCGCTGGGGAGCTCAGCATCGCCATCGACACCTACAGCTACGGAGTGgtgctgctggagctgctgacTGGCCGCCGGGCCCTGGAGATGGACGGCAGCTCAAGGACAACCTACCTGAAAGACCTGGTGAAAGAAGCTGatgaggtggaggaggaggagaaaggagGGCAAAAGAGTGAGAGTGGAGGAGGAGTGCAGGCGTCTGCCCCCccccctgctgaggagaaggtCAGACGGGCCGCCGCCCACATCTGGAGGAAACACCTGGACCCCCGCCTGCCCGCCCCCG
>TU73632
ccgcAGCCCTCTGCAGGTGACCCGGTCTCCGGGCTGTCCTGCAGCGCCCACTGCTGGCCTCTGGAGGAGGTGCTGCGCGGGACAGACAACTTCTCTGTGCGGCGCTGTGTGGGCGAGGGCGGATTCGGGCAGGTGTACCACGCCACCATGAGGAGCACGGAGTACGCCGTCAAGAAGCTCAAGGAGGACTCAGACCTGGACTGGACGCTGGTGAAGGAGAGCTTCAAGACGGAGGTGGAGAAACTAACACAGTACCGGCACCCCAACATCGTGGATTTCGGGGGGTACTGCATGGAGGCGGGGGTGTACTGCCTGGTGTATGTGTACATGCCCAGCGGCTCCCTGCAGGACAGGCTGCACAGCAAGGGCGGTGGCACCCTCTCTTGGGCGCAGCGGGTCACTGTCCTGCTGGGCACCGCCAGGGCCGTTCAGTTCCTGCACTCCAGTAACCCAGCGCTCGTCCACGGGGACATCAAGAGctccaaCATCCTGCTGGGGGACAGGTTGGAGCCGCGCCTGGGGGACTTCGGCCTGGCGCGGTTCTGCCGGGCGGCCCCGGGGGGGGCGGGGCGGACGAGCGCCGTGGCTTGGACAAGCAAGGTGCGCGGGACCCTGGCCTACCTGCCCCCCGAGTATGTCACCGCTGGGGAGCTCAGCATCGCCATCGACACCTACAGCTACGGAGTGgtgctgctggagctgctgacTGGCCGCCGGGCCCTGGAGATGGACGGCAGCTCAAGGACAACCTACCTGAAAGACCTGGTGAAAGAAGCTGatgaggtggaggaggaggagaaaggagGGCAAAAGAGTGAGAGTGGAGGAGGAGTGCAGGCGTCTGCCCCCccccctgctgaggagaaggtCAGACGGGCCGCCGCCCACATCTGGAGGAAACACCTGGACCCCCGCCTGCCCGCCCCCG

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009748 False 1089 mRNA 0.68 9 45320757 45326055
TU73631 True 1112 TUCP 0.66 9 45320843 45323950
TU73632 False 928 TUCP 0.66 7 45320843 45323322

Neighbor

gene id symbol gene type direction distance location
AMCG00009744 NA coding downstream 2429 45315275 ~ 45318328 (-)
AMCG00009746 LOC105912249 coding downstream 15384 45287018 ~ 45305373 (-)
AMCG00009747 cdk20,LOC107727427 coding downstream 37737 45281202 ~ 45283020 (-)
AMCG00009741 NA coding downstream 51145 45267403 ~ 45269612 (-)
AMCG00009740 NA coding downstream 73813 45245712 ~ 45246944 (-)
AMCG00009745 mecp2,LOC105898998 coding upstream 19926 45345981 ~ 45351180 (-)
AMCG00009754 NA coding upstream 71134 45397189 ~ 45402415 (-)
AMCG00009756 NA coding upstream 131757 45457812 ~ 45458370 (-)
AMCG00009767 NA coding upstream 352186 45678241 ~ 45678855 (-)
AMCG00009771 smc1a coding upstream 357505 45683560 ~ 45695262 (-)
G58808 NA non-coding downstream 70737 45184361 ~ 45250020 (-)
G58807 NA non-coding downstream 78824 45219629 ~ 45241933 (-)
G58761 NA non-coding downstream 201533 45090217 ~ 45119224 (-)
G58724 NA non-coding downstream 320523 44998032 ~ 45000234 (-)
G58707 NA non-coding downstream 403868 44916631 ~ 44916889 (-)
G58901 NA non-coding upstream 6160 45332215 ~ 45336884 (-)
G58902 NA non-coding upstream 11100 45337155 ~ 45339418 (-)
G58903 NA non-coding upstream 13445 45339500 ~ 45345259 (-)
G58904 NA non-coding upstream 46703 45372758 ~ 45373072 (-)
G58940 NA non-coding upstream 147480 45473535 ~ 45554714 (-)
AMCG00009742 NA other downstream 43160 45251637 ~ 45277597 (-)
AMCG00009739 NA other downstream 90300 45168941 ~ 45230457 (-)
G58653 NA other downstream 535623 44782918 ~ 44785134 (-)
G58589 NA other downstream 753923 44566069 ~ 44566834 (-)
G58584 NA other downstream 777948 44541894 ~ 44542809 (-)
AMCG00009755 NA other upstream 132688 45458743 ~ 45465377 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other upstream 311692 45637747 ~ 45642744 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other upstream 422621 45748676 ~ 45757951 (-)

Expression


Co-expression Network