AMCG00009778


Basic Information

Item Value
gene id AMCG00009778
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45904887 ~ 45913188 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009778
ATGAACCCGCTAATGAATGAATCAAATAACCCCCTCTGCCTGGTCTCCGTCACTGCTCGGGACTTTCCGGCGCGGATTGCCGTGCGCTGCGCCCATTGGTCCGCCGCTCGGAGGAGGCGGGTCCGGGCCGCCCGTGTGCCGGAGGCCGCTCTCACCTGCGCAGCGCTGTGTTGTGTGCGTCTCCCCCGCAACACGGCCCGTCGGGCCTGTCGGGTCGTCTCGGGAGGCTGTCAGGGCAGAGACTCGCTCGCTGTGCAAACGCTGCAGCTTTACCGGCGTGTCCGCGGCGACCTTCCTCCCCGGAGCAGCGACCTGCTCGCCCGGTGCCTCCCTCGTCACCCGTGTTTGTCCTGTAAACTGTCCGCCCGGCCGCGCCGCAGTGGGAGAGACGGGGGTGTAGTCAGACTGCAGCCTTCACTGCATACACTGAGGCTGCGCTGTAGCGCCGGGCTGGAGGCTGTCGGAGCGGCCAGCACCCTCTGCCTGGGTGAGACGCGCTGTGCTGAGAGCATGAGGCTGGCCGTGGGGGCCACCTGGATCCTCGCCAGTGCCATACTGGGAACGGACGGGGGCATTGTACTGGTGCGGCAGCTACTGAGCGctcccaATGATCAGCCCACTCCAGAGCCGCGGCCGCGCAGGTACAAGTGTGGGCTGCCCTCCCCCTGCCCTGAGAAGCACTTCGCCTTTCGCATCGTCAGTGGAGCCGCCAATGTTATCGGGCCCAAGATCTGCCTGGAGGACCACATCCTGGTCAGCAGTGTGAAGAACAACGTGGGTCGAGGGTTGAACATCGCTCTGGTCAATGatgtGGGGGAGCTGTTGAAGCTGAACGAGGAGGCGCGCCGGCTGTTCGAGGAGCTGGGCAGCAGTGCGATCAGGGAGCTGGCCTTCAGGGACAGCTGGGTGTTTGTGGGGGCCAAGGGCATCGACAGTAAGAGTCCCTTCGAGCAGCGGATGAAGAACAGCAAGCTGACCAACAAGTACGAGGGCTGGCCTGAGGCGCTAGAGATGGATGGCTGTGTGCCGCAGCGCCCCCCCGAGGAGGCGTAGCCACATGGCACGGCGCCGGCACAGCGTCCCACGGAGACGACGGGGGCAGGGGGGGCAACTGACGGTCCAAAATAAACAGCAAGTGAACTGTGGGGGAAGAAACCTGAACTCATACTGCACTGCTGCCCCCAGGGACTGAAATGCCCctatacccccccaccccaggacTGGCTGTGTGTGGCAGTGAGGAGGGGCAGCTGCCCTTCAACTcgtgtgtgtatgggtgtgtgtgggtgttgggAGGGGCGCACGCAAGGCTCTCTTggtagaaaatgtatatatatatatttttttgtatttacttttgtcCGTCAGTGACTGGGCCGCTTCGGGACAGCAGCTAGTTCTGGACACTGTTGTGGAGTGggctggggggggtgggtgtCGGTCCTATCCGAGGGGCCGCAGTGCTGGGTGAGAGTGGGGTGGACTGGTGCTGATGCTCATGGGGGTATTGTGTGACTTGCCCAGCCTGATGGGGAAGACATGAATCCAATCTCAAATCCAGGCCCAGTTTGTATGCCCCTGTGTCAGAAAAGCTGTAAGGTTTGATTTGCTGCAGTCTTCTGCAGTAGGACCAGTCTGTCAGTAATTTGGTTACGATGGGCACGGCGTACTCCACTCTTCAGGTGTGGCGAGGTGTCCCGGTCGGGACCACGCGGCGAATAATGGACAGAGCTGCCATTTCTTCCTCTGAAAGCGCAATGGCGTGTCGCAATGTTCGACCCCGGAGTTGCGAGCTGCTTGTTgatgttcagtgtgtgtgtgcgtgtgcgtgtgctcACTTCATAAAACTGTCAGACCAGACCTGGGCCTGTCTTTGGAGAATAAACCCTCAATGACActtctcatttgtttttatatgaataaatgtgCATTTGCTGTTCCTCTAGACCCTAcgtgatctctctctctccgtttaTATAACACTGCACAATCCCATAATATCTGCTGTAGTGAACTGAACGAGTGCGGTTGGCCGAGGACGATCACGGTGCTGTGGGTTCAATGCTGGGCTGCAGCGGCAAGGTCCGTCCTGCGGGGGGAGACTGTGTGAAGCGCGTCCTTCACAGGACTGAGTGTGGTGGGTGGCCACAGGAGGAGTGCAGATAGAGCGCAGCAATGGGGTTCATGAGTGGGGCATCAGCACTGCAGCCGTGGCTCATATTCACAATGCTGCTGTGAATAGTttattatacagttatatatattatactcaCAGTACACAGTGAACGCACAGTGTCTGCACCACGAGAGGCCCGTGTGGCCGAGGAGTGTGCTCAAGAACTGAGGCATTAGCTTTTCAGTAATTATACACCCCCTCACTTCCTCACATCCCCACACACTTCCACCGTGCACTGCCAGCACAGCCTGCCTCTTCTGTACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009778 True 2442 mRNA 0.59 10 45904887 45913188

Neighbor

gene id symbol gene type direction distance location
AMCG00009772 NA coding upstream 25872 45875633 ~ 45879015 (+)
AMCG00009762 NA coding upstream 244401 45656761 ~ 45660486 (+)
AMCG00009765 NA coding upstream 248650 45650084 ~ 45656237 (+)
AMCG00009764 LOC103384391,LOC107373447 coding upstream 257346 45643238 ~ 45647541 (+)
AMCG00009763 plxnb3,LOC101165957,LOC102313277,LOC102780548,LOC102199036,LOC101474638 coding upstream 275509 45598607 ~ 45629378 (+)
AMCG00009780 NA coding downstream 6243 45919431 ~ 45921344 (+)
AMCG00009784 NA coding downstream 192212 46105400 ~ 46109996 (+)
AMCG00009785 NA coding downstream 291920 46205108 ~ 46217730 (+)
G59128 NA non-coding upstream 30455 45874123 ~ 45874432 (+)
G59091 NA non-coding upstream 141749 45759675 ~ 45763138 (+)
G59087 NA non-coding upstream 146618 45757110 ~ 45758269 (+)
G59086 NA non-coding upstream 148117 45756252 ~ 45756770 (+)
G59085 NA non-coding upstream 148931 45755589 ~ 45755956 (+)
G59142 NA non-coding downstream 115507 46028695 ~ 46028969 (+)
G59152 NA non-coding downstream 152240 46065428 ~ 46133506 (+)
G59156 NA non-coding downstream 199032 46112220 ~ 46112856 (+)
G59169 NA non-coding downstream 256573 46169761 ~ 46187549 (+)
G59180 g6pd non-coding downstream 277458 46190646 ~ 46195343 (+)
G59084 NA other upstream 149772 45754586 ~ 45755115 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other upstream 320160 45576539 ~ 45584727 (+)
AMCG00009760 NA other upstream 328923 45573270 ~ 45575964 (+)
AMCG00009759 NA other upstream 332632 45559977 ~ 45572255 (+)
AMCG00009761 NA other upstream 393850 45507767 ~ 45511037 (+)
AMCG00009782 LOC108266008,LOC103385383 other downstream 31444 45944632 ~ 45997710 (+)
AMCG00009781 NA other downstream 86854 46000042 ~ 46022184 (+)
AMCG00009786 NA other downstream 190948 46104136 ~ 46128356 (+)

Expression


Co-expression Network