AMCG00009785


Basic Information

Item Value
gene id AMCG00009785
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 46205108 ~ 46217730 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009785
CGCACAATACAGGACAACGTCATCACAGCGCGCCTCCCCTTTCAGGGCGGGACTGCGGAAGTGCGGCGGAAGCGCCTCAGCTGGCGTCCGGGCAGTGTCTCTCTCGCTGGGGATTTCCTGCTCGGATAGCGACCGTGTTTACCGGACCTGGTGACGGCACGGACACACCGGACTATTGCAGCCTGAGCAGGAGAGGCCGAGCGGGGCCGTGTCGCCATCAGGACATGTCGTGTCGGTccggtgtgtctgtgttgtgaagACCGTCCAGACCTCCGTCGCCCAAACAGAGCAGACAACGCAAACTACAACACGACACCAGTCGCTTCAGAGCCGGCCACAGCAGCGGGGGAGGCTGACAGTCTGTGGGAGCCATGGTCCAGCCCAAGGGGCTCATGGGTAACGAGCTGAAGTCTGACATGATTGGTGGAGATGGGTCGGTGGGGCTGCGGCGGCAGGCGTCCATGCAGATCCCCCCGGAGCTGGCGGCCAACGAGGCCGTGCAGAGACTGCTGACCGAGAACCAAGAACTCCGAGACGCCATCCGGCAGAGCAACCAGGCACTGAGGGACCGCTATGAGGAGATGCTGGGATTCCGCGAGAAGACGCGGCAGGAGCGTGGGTTTCTGATGGAGCGCTTCCGGGAGGCTCGTGCCCTAGTGGAGCGTCTGACCCGGGAGAACCGGCTCCTGCAGGGCCATCTGGACCCCCAGCAGAACCAGAACCAcagccagagccagagccaCAGCCCCTCACCCCAGGGCAGCCTGGGGACGGCCAGTCTTGAGGAGGAGGAGCGCAGCTCAGAGGAGGGGCCCCTGGAAGCCAAagggggggtggagagagaggcagggacaGTGACTACCCCCCAGAGTGTGcccaAGGAGGAGGGGAATGAGTTCCTCAGGCTGCTGAAGGCCCATAAGGAGCAACTGGAGGAGGGGCTGCGAGATCTGCGCAGACGCAACCAGCAGCTGGAGACGCAGAACAAGGAACTGCAGACTGCAAATGCGCAGCTGAAGCAAGCTCTGGCACAGATACAGGGCAGCAGTGAGGGTCTCCCAGTCGCAGTGACCCAGGAGAGTTTTCAGGGCAGTGGGCAGCAGAGGACTGGCAGCAGggaggAGGAGACGGACAGTGAGCTGCGCAGAGAGGTGTCTCAGCTGACAGAGCAGATCCGGGCAGCCGAGGCCAGGATCAGAGAGCTGCAGGCTCAGGTGGAAGGGGCTCAGAAGTCCTCGGCCCAGCTGGAGCGCGCGGAGTCTATGCTGAAGCAGCGAGAAAGGGAGCTGCACCGGGAGATGGACCAGAGCCTGCAGCTGTCAAAGGACATCGAGTCTCTGAAGGCGCAGGTGACGTCTCTGCTGGCGGAGCTGCAGGAGAGCCAGAGGAGCCTGGAGAGGAGTGAGGGCGAGCAGCGCGCGCTGGAGGACAAGCTGCGCAGGATGGGAGAGAACCTGCAGGTGGTGGAGAGGGACAGCGAGCAGATGAAGAAGCAGCACAGCGTGGCGACGGACCAGCTGCGCCTGCAGACACAGAGCCTGGAGTCGGCGCTGAAGACCGAGAGGCACATCGTCATGGAGGAGAAAGCCCAGGGGGACACAGTCACAGTGACATGGGACACTCCGGGCACAGCAGGACAGGAGGCAGAGCGAGCTCTGGCACTGAAGCAGGAGCTCATTGACAAACTGAAGGACGAAGCGGAGCAGCAGAGGACAACCCTGGAGACAGTGCCAGTCCTTACGGCCCAGGCCGAGATCTTCAAGGCCGACTTCCAGGCGGAGCGAGCTGCGCGGGAGAAGCTGCACGAGCAGAAGGAGGCTCTGCAGGAGCAGCTGGCGCAGCTGCAGGCGGAGAGGGAGCGGCTGCTCGAGGGGGCGTCTCGGGCTCGCATGGAGGAAATGCAGCAGCGGCACCTGGAGAATTTCCGCCCCCCCCTGGCCCTGCAGCGCCCCCAGCCTGGTGTGTTCCCCGTAGCCACGGTGCCGTTCAGCCCGGCTCAGGACCCCTCGCTGCGGCGGCGCAGTTTGAATGAGGAGCTGCCCGACTTCCGCTGCCCCAAGTGTCAGTACCAGGCACCGGACATGGACACCCTGCAGATACATGTGATGGACTGCATTCAGTGAGGGGGGAGGaggacaggagggagggagggaagagttCTCGGAAGGAAGGGAGCGGCACTCACCGCTCCGCAGTCTGTACATATATCTGTATCCATTGTGTGTCCTTGCTGCCATGGGCTCTGAATGTAAATACTGTACACAACCGTTCCTCACGCAGCCCCACACCACGGCCGCTCTTTTTAAACCTCCTCTCTGGGCTGTTGATGAAGGTCAGGCCTGTGGTCcctcccccccccccccgttcaCGCCCAGGCCGTGCAGGCTGCGTCGCTGGGCTCAGGGGACTATTGTGAAGCCGCTGCTACCGGATTACACCCTCACGTCTTCGAATACGGTCTAAATAACAATTCCTACTTCGCACTTTTCTTTTGTCGATTTGTTTAATTCGTATCCAATCGTAATCTAAGACTCAGCAGCCAAAACCCCCATAACTAAGTCATGCCAGGACCTCTGGTTTCCCAGCCCCTGTGTGGGCTGCAGGGCTTTAGGGGTCCTTCCCCCTGTGCTCAGCAGGACCCCTGTGCTCAGCAGGACCCCTGTGTTTATCTCAGCAGCTCGCTGCCGGGCCCAAAGCATCGGCATGTGACACGGCCCGAGTCCTGCAGGATGCAGCGCTGACATCATACTGGACGCGGTgcgagaggagagagaggggggcatCTGTGTATCACAGTTAACAGCATGTCTGCATGTGTGAAGAGTCCCCTCCAGCGGCCGCGGGTCCCGCAGTGTCCCAGCGTGTGTAGACGGTGGTGGGGGGGCGATGTTGTTCTTGCTTGTATGATTTACTAGTTGATAAAATGATCTGcaaaaatttacttttttttttttttgtgttaagtCAGAATCTATGTATGGTTGGACAGATGGTTTAATGtggatcaaataaaaaaaaaaaactgcagtttgaA

Function

GO: NA

KEGG:

id description
K07210 IKBKG, IKKG, NEMO; inhibitor of nuclear factor kappa-B kinase subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009785 True 3034 mRNA 0.61 16 46205108 46217730

Neighbor

gene id symbol gene type direction distance location
AMCG00009784 NA coding upstream 95112 46105400 ~ 46109996 (+)
AMCG00009780 NA coding upstream 283764 45919431 ~ 45921344 (+)
AMCG00009778 NA coding upstream 291920 45904887 ~ 45913188 (+)
AMCG00009772 NA coding upstream 326093 45875633 ~ 45879015 (+)
AMCG00009762 NA coding upstream 544622 45656761 ~ 45660486 (+)
G59180 g6pd non-coding upstream 9765 46190646 ~ 46195343 (+)
G59169 NA non-coding upstream 17559 46169761 ~ 46187549 (+)
G59152 NA non-coding upstream 71602 46065428 ~ 46133506 (+)
G59156 NA non-coding upstream 92252 46112220 ~ 46112856 (+)
G59142 NA non-coding upstream 176139 46028695 ~ 46028969 (+)
G59179 NA non-coding downstream 1351 46219081 ~ 46220515 (+)
AMCG00009786 NA other upstream 76752 46104136 ~ 46128356 (+)
AMCG00009781 NA other upstream 182924 46000042 ~ 46022184 (+)
AMCG00009782 LOC108266008,LOC103385383 other upstream 207398 45944632 ~ 45997710 (+)
G59084 NA other upstream 449993 45754586 ~ 45755115 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other upstream 620381 45576539 ~ 45584727 (+)

Expression


Co-expression Network