Gene
RNA
| Item | Value |
|---|---|
| gene id | G48637 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 225265 ~ 225944 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60786 | True | 622 | lncRNA | 0.58 | 2 | 225265 | 225944 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008371 | NA | coding | upstream | 6390 | 214645 ~ 218875 (+) |
| AMCG00008367 | cacna1ab | coding | upstream | 97536 | 127056 ~ 127729 (+) |
| AMCG00008368 | NA | coding | upstream | 113958 | 97569 ~ 111307 (+) |
| AMCG00008363 | NA | coding | upstream | 154515 | 60289 ~ 70750 (+) |
| AMCG00008362 | clpp,LOC107590418,LOC107753176,LOC106606781,LOC107724426 | coding | upstream | 167391 | 55562 ~ 57874 (+) |
| AMCG00008372 | trmt1 | coding | downstream | 8951 | 234895 ~ 243054 (+) |
| AMCG00008374 | mri1,LOC107594353,LOC107703717,LOC107700835,LOC107709591,LOC106595636 | coding | downstream | 27535 | 253479 ~ 256222 (+) |
| AMCG00008373 | LOC104964355 | coding | downstream | 43816 | 269760 ~ 273986 (+) |
| AMCG00008386 | NA | coding | downstream | 82042 | 307986 ~ 311984 (+) |
| AMCG00008384 | NA | coding | downstream | 101679 | 327623 ~ 340268 (+) |
| G48636 | NA | non-coding | upstream | 2478 | 222053 ~ 222787 (+) |
| G48631 | NA | non-coding | upstream | 20364 | 204481 ~ 204901 (+) |
| G48618 | NA | non-coding | upstream | 128136 | 94649 ~ 97129 (+) |
| G48647 | wdr83 | non-coding | downstream | 25363 | 251307 ~ 252482 (+) |
| G48716 | NA | non-coding | downstream | 31638 | 257582 ~ 258264 (+) |
| G48720 | NA | non-coding | downstream | 38076 | 264020 ~ 264390 (+) |
| G48721 | NA | non-coding | downstream | 40630 | 266574 ~ 266881 (+) |
| G48796 | NA | non-coding | downstream | 201937 | 427881 ~ 488584 (+) |
| AMCG00008375 | cacna1a | other | upstream | 20870 | 153189 ~ 204395 (+) |
| AMCG00008369 | NA | other | upstream | 130704 | 87317 ~ 94561 (+) |
| AMCG00008376 | NA | other | downstream | 34330 | 260274 ~ 263022 (+) |
| G48811 | NA | other | downstream | 247801 | 473745 ~ 551906 (+) |
| AMCG00008397 | ccdc130 | other | downstream | 291555 | 517499 ~ 525325 (+) |
| G48846 | NA | other | downstream | 361336 | 587280 ~ 588446 (+) |
| G49013 | NA | other | downstream | 650610 | 876554 ~ 879513 (+) |
