G49375


Basic Information

Item Value
gene id G49375
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1879621 ~ 1880962 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU61724
TTTTTTTGgttcaacattttattgtacaaaACTTTAACATTAACTTTATCTGCATCTGTACAGCATgtatacacaaaaacactggaGGAATACAGAAGTGACAGGAGAGGAACAATCAGCTTTCTGGGTTTACTGAGAGCACCGTGCAGGAAACAGATATCGAACATGAAACCACAGCACTGTTCCTGGCAACTGAACAAGAACCAGACAGGCTTTGAATTAGACCCAGTCGGGCCAAAGAGCACAGCTGACCCTGCGCAATAAAAACAAGCAGTTTAAGGAAACGGCAGACGAACTGAAACTGAACTTTAGACGCTTAGAAAAAGGACACTCCAAGCACGTGGTCTTCTAGGAAAAAACAATGTACACCTCTTATATCGGCAGAGTGGGTTTTACACCGGTGACTGAGCAGTATGGAGGGGGGCTAATTCCAGACATCTCTGTAGGTCTCCCTGAACTATGCTTTGCAAAACGGGTTCTTTCGTATCATGAACATCAAGCTCAGACTAACCTTCGTCAGTCACTTCCCCGTCACATGCTTCACCCGCACCTGGACCGAGATACCGCCTCCTCACCAAAACCCCCAAACCCACACAAGCTGCTTCCAGGACCATGGCAGCCGACTGCACCGCTAAGACTCAGCCGGCAGCTCCGGCTCGTCACTATTTGTGCAAGAGACGGCCTCGATAAGAATCTGTTACATCCTGCCAATGCAGTACCAGCGTCGAGAGGTCCTCCACACTAGACAGACTTCCTCACCCGAGGCCTACGGCCTGCCTTTACCCTTTCTCTGCTTGAATCCTGGTTTCCCCCCAGGCCTCGCCTTGCTCTGCCCCTTTCCCTTCAACCCCGGTCGAGGCTTCCCCTTCTGCCCCTTGAACTTCAGTCCCTTCGCCGCTTCCCCGGTGCCCCGTCGCCCGCCCGTCCCCGCTCGGCCTTGCCCCTGCCTTGCCCCGGGGAGCCCTTGCCGTATTTCGGGCCCCTCTTGGATGGTCCCTCCCGGGCGGGGTCTCGGCCCGCCTTGTCCCCTCTCTCCGCGGAGAACTTCCTTTTCTTGAAGGGATTGTGGGGCTTCCCTTCAGCCCTCCTCCGCTTCCGCTTGGAGGCGTCTGGGAACATGTCTGAAAGGAAACGAGGAAAGGAGGGGACGGCTTTAGATCACGACCGCAATCGTACATCGCTCAACACGTACACAAGGAAAGCAAGgcctttgcattttaaattgtgacaacctgtctagtaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61724 True 1251 TUCP 0.53 2 1879621 1880962

Neighbor

gene id symbol gene type direction distance location
AMCG00008463 NA coding downstream 9413 1862614 ~ 1870208 (-)
AMCG00008467 NA coding downstream 67927 1809871 ~ 1811694 (-)
AMCG00008465 NA coding downstream 71105 1804929 ~ 1808516 (-)
AMCG00008464 NA coding downstream 76536 1796566 ~ 1803085 (-)
AMCG00008457 NA coding downstream 114543 1741434 ~ 1765078 (-)
AMCG00008470 dnmt1 coding upstream 15200 1896162 ~ 1913755 (-)
AMCG00008469 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 coding upstream 54342 1935304 ~ 1936419 (-)
AMCG00008471 NA coding upstream 69698 1950660 ~ 1951836 (-)
AMCG00008477 NA coding upstream 271649 2152611 ~ 2165650 (-)
AMCG00008482 NA coding upstream 288369 2169331 ~ 2172673 (-)
G49346 NA non-coding downstream 140292 1738280 ~ 1739329 (-)
G49232 NA non-coding downstream 251256 1626287 ~ 1628365 (-)
G49211 NA non-coding downstream 555352 1321891 ~ 1324269 (-)
G49210 NA non-coding downstream 558642 1320763 ~ 1320979 (-)
G49209 NA non-coding downstream 559750 1319610 ~ 1319871 (-)
G49389 NA non-coding upstream 173553 2054515 ~ 2066295 (-)
G49393 NA non-coding upstream 187121 2068083 ~ 2075648 (-)
G49394 NA non-coding upstream 188828 2069790 ~ 2070872 (-)
G49414 NA non-coding upstream 355565 2236527 ~ 2236861 (-)
G49419 NA non-coding upstream 478898 2359860 ~ 2360112 (-)
AMCG00008462 NA other downstream 20130 1798845 ~ 1859491 (-)
AMCG00008466 NA other downstream 39522 1819774 ~ 1840099 (-)
AMCG00008452 NA other downstream 224142 1629854 ~ 1655479 (-)
AMCG00008428 NA other downstream 938949 928937 ~ 940672 (-)
G49054 NA other downstream 1031575 841883 ~ 848046 (-)
AMCG00008474 NA other upstream 192821 2073783 ~ 2085025 (-)
AMCG00008491 prkcsh,LOC102779661 other upstream 755953 2636915 ~ 2702422 (-)
G49605 NA other upstream 1025713 2906675 ~ 2908665 (-)
AMCG00008554 NA other upstream 1549852 3430814 ~ 3871269 (-)
AMCG00008547 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 other upstream 1888722 3769684 ~ 3777354 (-)

Expression


Co-expression Network