G49599


Basic Information

Item Value
gene id G49599
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2910694 ~ 2910939 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU62039
GGGGACGGACGGACACAGACCGAGTCAATACCGGCGAATCACAGTGGCTCTCGTGTCCCCATACGTCACTCAAGGGTAACTCCCCCACACCCCCAATCAGCCCAAGAGAATAAACAACCAGCCCGCCATTGTTTAATTCTGCATTATTCAGGCACTGTCCCCCAGGTTCCATTAACCCCCCACAGCCAGGAGGGAgaccaattaagcaattaaagaGATGGAACGCACAGAGAATTCTCAGAATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62039 True 246 lncRNA 0.52 1 2910694 2910939

Neighbor

gene id symbol gene type direction distance location
AMCG00008505 NA coding upstream 3753 2904559 ~ 2906941 (+)
AMCG00008497 NA coding upstream 87598 2815396 ~ 2823096 (+)
AMCG00008498 keap1 coding upstream 99395 2798540 ~ 2811299 (+)
AMCG00008499 NA coding upstream 116814 2787868 ~ 2793880 (+)
AMCG00008493 NA coding upstream 190033 2715820 ~ 2720661 (+)
AMCG00008509 NA coding downstream 84002 2994941 ~ 3003560 (+)
AMCG00008510 prdx2 coding downstream 105517 3016456 ~ 3019921 (+)
AMCG00008514 NA coding downstream 109656 3020595 ~ 3021066 (+)
AMCG00008516 LOC106601330 coding downstream 176241 3087180 ~ 3102783 (+)
AMCG00008515 NA coding downstream 208170 3119109 ~ 3124136 (+)
G49598 NA non-coding upstream 66 2909662 ~ 2910628 (+)
G49582 NA non-coding upstream 24556 2885831 ~ 2886138 (+)
G49541 NA non-coding upstream 97801 2812174 ~ 2812893 (+)
G49431 NA non-coding upstream 446027 2445185 ~ 2464667 (+)
G49341 NA non-coding upstream 697201 2212429 ~ 2213493 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding downstream 117039 3027978 ~ 3042595 (+)
G49738 NA non-coding downstream 445760 3356699 ~ 3359529 (+)
G49754 NA non-coding downstream 503242 3414181 ~ 3443897 (+)
G49753 NA non-coding downstream 533063 3444002 ~ 3445127 (+)
G49914 NA non-coding downstream 1052189 3963128 ~ 3964014 (+)
G49583 smarca4,LOC102779508 other upstream 21798 2886766 ~ 2888896 (+)
G49523 NA other upstream 140650 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 699180 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 767300 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 802902 2088480 ~ 2107792 (+)
AMCG00008526 NA other downstream 518958 3429897 ~ 3885604 (+)
G49980 NA other downstream 1245149 4156088 ~ 4160062 (+)
G49982 NA other downstream 1251119 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1651052 4561991 ~ 4572874 (+)
G50215 NA other downstream 2685084 5596023 ~ 5596799 (+)

Expression


Co-expression Network