G49982


Basic Information

Item Value
gene id G49982
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 4162058 ~ 4165483 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU62530
CTGTGTTCCCCAAATGCCTCCATTATGGAgccagaaagaaagagaaacccATCCAGGTAGAGAACAGTTACATCAGTGACTGTGtctttatttacaatacattcgTTAGCTTTACAAAGTAGAACTTCAGGTCTCTCCCAGACAATTGGGATAAGAAAacagataataaatacatttgataaagTACTTATACACAGGTCTTTGTTCACATATACAGAAACACTGGTTAAGATACATGCCAGCAATAAGCACAGTCACATTGACTTACAAACCAGTCTATAAACTGTTATAGAATCTCAGAAAGGTACTTTATGGGGAAGTCAAAGGCTGCCTGAGGTTGCTTTGCAAGTGATGCCGTTGTGGAAGAATGCCTTGTAGGGGCATGAGAAGATCAAGGAGGGGCTGGGATTAATATCGTGAGAAGGGGTTAGAGATATGGAAACATTGAGTAGAAATATGCAACATTCCAATGCCAATCCATGCCCAAACCTCAATTCAGCAGATTTCAGATTCCCCTTTTGTCTTGAATAGTGAATCCACCGTACCGGTTTGGAATTGACAGAGTGCTGCCTGcgtttgtcattttcattggctGTCAGTACTTGGCTCTAAAGCTGTAATTAATAGTTGCTCATCTGTACTTTTTCGCAATTAAATCAGGGCGAACATGACAAATGATGTATTTATGGATTGTGGATTTCTGTCaaaatgactttttaattattattattttttaattcagccagGTGATGAGCTGAAGGCCCTTGAGTCAGATTAGTGAAGTtagttaaaaaattaaataaaaactaacaatATTGTCCCTTTCTTTTGACAACTATCTTTTTACTTCAATAATTACACAGACTGACTTCTTAATTACTCCTGATCACCTGATTACAGGtcacactgtcattttaatttaaagtaattaaggAAGGAGTGATTTGTCATGAGATCTCCTGTTACGGATTTAAGGATGCCAATTACAGCTTTCAAGGCACAGACTGAATGGGGAAAGCAGGCAGCGCTACTCATGCAGGTTCTAGCCTTGTATTCTAAAATGAATCCATGCGACTAAGGCCCGGCTTTGTGGTGAAGAGTTACATGTGGCTGTATGACGTTTCACTTCAGTTTCCCCCATGGGATTTCCTCTGGGGTTTCAGGGTTTTCCACAGAGCGCTACCACCCACTGAAGTCAGTACAATAGTTAACGGAAAAGTTACTGCATTTAACCCTGAAAGTTGTTcaaaacatattgttttatgGGTATGGCTACTGTTCTTATTAAGGATGGTGCACAATATGCCAATGGAGACGAGCCTGCAGCATGCCTGTACAACCCCCCCTTTACAATGTTAATGTACTGCaccatgtatgtatatatctaacCCTTTACGCCTTATACACCCTGGTAAGATCATAGGATCTTTGCACTTTGAATATGGTTTCGAATGGGTTCAACACGCCTGCACTGTGCTTTACTCCACTGGACCCTGGGAATACCACGAATACACCATGATCAGTGCAGACCATGTCTCATTCATGGTAGAGAGTAGGAAAGCATAGTAAAGGCAGGTTGTAACCAGAGTAAACCACTGTACAACTATGGTATACAACTATATAAATGCTACAGTACATTTAGCAGGGTAAACTGGCATTCAGGAACTGCCTATATATCTACTGGCAATCTTTGTTAAAAAGtgcaaagttttatttttcctctgcaAGTTACGCTGGGCAAAACGCGGCCCTGGAGGACAGCAAGGGTGCGATGGGTGCTTTGTGTGCCTGGGCTGCACTTCACTTCATCTGTTCCCCCATAGTCCAAACTGAGAAGCCtttcttccatttatttatgcatgatttgtttttgtttaaaccaAGCCCACGAATGCGCTAGGAATGTTACTGAAGGAGGCCAGAATTTCCTGCCAAAACAGGAGTGAGCTGGGGGGATTCAGAATGTTTTTCTACACAAAAAATTGAATTGGAGAGTTATAGTAGCCAAAGGAAAGTAAGGGGAGGTTGGTACACCCCCCTAGACCCATTTATTTCAAGCTTTGTCAACACCCTCTTTGGGAGGAGGATCCTGAGGGTTGTGgggatttaatttcatttaatttctgtgttcTTTAATCATGCTCCCTGCGCCCTGGAGCTAGGATTCCTATCAATGATTTTTCTGCCACTTACTGACTGACCACCTGGGCATGGCACAAAGTGCCAATTGAGTCTAATCAAATGCTACAGGGTGGTAAACATAAGTGCCTCTTAACACCTGAGGTTTGTCCAGATGGGGCTCACATTGAACTTCCCATCGGTGATCTGTTTTTATTAGGATACAGGGTGTTCCCTCCCTATCACACCTCTTATCAATAGGGTTTAAGTTTAAGACTCCTTGACTTCCCACATGACTGGCTGTTCAGTTTCACACCCATTGCAGGGCTGCAGTTTGGAAACCCATGACCGGCCTGCCCTAATCTGCAAAATCAGGGCCGTGGGGCACATGCTACAGCAAAGCGATATCCTACTTAGCCGGCTTCACTGCAGTGGAATCCAATTGGTTCGACTGGTCCTCCGAGTGTCGTCCGGCCTACTTCCAACATCCTGCTTCGACAGGCGTGGGAGAACTCGTCTTTCTCCTGCCACAACCGATTTACCTATCGTGCATTGCACGGTCCTAACCAAAGTCGCACAAAGTCGAACCTAATTCCTCACAGACTTGTATTCTCTTTGTGATCATCTCCCCTCTGCAACATTTCGGTGGAAGATTGGGtctgagggagggggggagtcATGACTGTTAGTGTGCAGAGCATGTACAGTAAACTGCACAGACTGAACCTTCTCTTCTCTGCCTCCCAGCTAGCTTCAAATAGCCACTAGCCACCCCACCACCTACCACGCTCAGGGATATGCATTCTCCCTGGGCACCCACACCCTGGGTTCCTGTCTCCTACATTAGCTCCTGCTGCAACTATGCTGACCAACTGAGGCAAGCTTGCTTTGATGGGATGGTGGtaggagggaaggagggagggttGGAGCCAGGCCTCTCTGTAGACCTGAGGAGGCTTCCAGTTCCACTTGGCAAAGAAGGGTACCTCTTCTCCTTCAAGGTGAAGGGCCAACCACGACCTGGACTGTGGCTGGTGTTTCTTCAGAGCCTGTTCATAGCGGTCTTCTCTGAACTTTGGAAGGAGCTGATCTCCCACCTGCGAAAAGTACTGCCCTTGAAGTCGCCCTGCCTCTTGGCGATCTTGTAGATCTTCTTCAGCACCGCCCTGCGGAGAAGGATATACACCCAGGGGTCCAGGATTTGGTTCCAGGAGGCCAACCTGACGCCTAGAAACATCAGCCACCTGTAGTGCTCCAGGTCCTCGTTCGCCTGGCTGTAGGACCTGGTGACTGTCATCATGCCAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62530 True 3426 TUCP 0.45 1 4162058 4165483

Neighbor

gene id symbol gene type direction distance location
AMCG00008569 NA coding upstream 63902 4097796 ~ 4098156 (+)
AMCG00008559 NA coding upstream 138565 4022525 ~ 4023493 (+)
AMCG00008560 NA coding upstream 151913 4009198 ~ 4010145 (+)
AMCG00008555 NA coding upstream 201008 3957541 ~ 3961050 (+)
AMCG00008556 gcdh,LOC102794743,LOC100704678 coding upstream 222145 3934002 ~ 3939913 (+)
AMCG00008579 NA coding downstream 345507 4510990 ~ 4512060 (+)
AMCG00008588 NA coding downstream 634971 4800454 ~ 4812907 (+)
AMCG00008587 NA coding downstream 658644 4824127 ~ 4835656 (+)
AMCG00008590 NA coding downstream 733962 4899445 ~ 4904073 (+)
AMCG00008593 LOC107093428 coding downstream 877271 5042754 ~ 5055756 (+)
G49944 NA non-coding upstream 127006 4034749 ~ 4035052 (+)
G49938 NA non-coding upstream 135812 4025101 ~ 4026246 (+)
G49914 NA non-coding upstream 198044 3963128 ~ 3964014 (+)
G49753 NA non-coding upstream 716931 3444002 ~ 3445127 (+)
G49754 NA non-coding upstream 718161 3414181 ~ 3443897 (+)
G50011 NA non-coding downstream 142343 4307826 ~ 4308836 (+)
G50055 NA non-coding downstream 296879 4462362 ~ 4468763 (+)
G50061 NA non-coding downstream 322516 4487999 ~ 4488238 (+)
G50066 NA non-coding downstream 350013 4515496 ~ 4527552 (+)
G50086 NA non-coding downstream 417419 4582902 ~ 4583205 (+)
G49980 NA other upstream 1996 4156088 ~ 4160062 (+)
AMCG00008526 NA other upstream 276454 3429897 ~ 3885604 (+)
G49583 smarca4,LOC102779508 other upstream 1273162 2886766 ~ 2888896 (+)
G49523 NA other upstream 1392014 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 1950544 2209483 ~ 2211514 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 396508 4561991 ~ 4572874 (+)
G50215 NA other downstream 1430540 5596023 ~ 5596799 (+)
G50243 NA other downstream 1573058 5738541 ~ 5742750 (+)
G50448 NA other downstream 2792128 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 3131403 7296886 ~ 7315850 (+)

Expression


Co-expression Network