G50255


Basic Information

Item Value
gene id G50255
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 5941207 ~ 5941527 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU62856
attgatttgcatgttaatgagtgaaataagtatttgatcccctatcaatcagcaagattaaaagggagtgctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccattgccaagcagcttggtgagaaggtgacaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62856 True 265 lncRNA 0.43 2 5941207 5941527

Neighbor

gene id symbol gene type direction distance location
AMCG00008604 NA coding upstream 58159 5881993 ~ 5883048 (+)
AMCG00008607 NA coding upstream 93526 5844345 ~ 5847681 (+)
AMCG00008605 NA coding upstream 164525 5766764 ~ 5776682 (+)
AMCG00008606 NA coding upstream 183572 5744804 ~ 5757635 (+)
AMCG00008601 NA coding upstream 305459 5614919 ~ 5635748 (+)
AMCG00008616 NA coding downstream 89320 6030847 ~ 6045870 (+)
AMCG00008617 NA coding downstream 167436 6108963 ~ 6119352 (+)
AMCG00008618 NA coding downstream 246967 6188494 ~ 6207751 (+)
AMCG00008619 NA coding downstream 364199 6305726 ~ 6363030 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding downstream 751218 6692745 ~ 6719091 (+)
G50214 NA non-coding upstream 346155 5594712 ~ 5595052 (+)
G50213 NA non-coding upstream 348276 5592436 ~ 5592931 (+)
G50212 NA non-coding upstream 350006 5586800 ~ 5591201 (+)
G50206 NA non-coding upstream 361185 5579222 ~ 5580022 (+)
G50196 NA non-coding upstream 380598 5560021 ~ 5560609 (+)
G50336 LOC104962440 non-coding downstream 401167 6342694 ~ 6342978 (+)
G50340 NA non-coding downstream 430905 6372432 ~ 6372911 (+)
G50342 NA non-coding downstream 433138 6374665 ~ 6375034 (+)
G50346 NA non-coding downstream 549130 6490657 ~ 6518591 (+)
G50362 NA non-coding downstream 687911 6629438 ~ 6629646 (+)
G50243 NA other upstream 198457 5738541 ~ 5742750 (+)
G50215 NA other upstream 344408 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 1368333 4561991 ~ 4572874 (+)
G49982 NA other upstream 1775724 4162058 ~ 4165483 (+)
G49980 NA other upstream 1781145 4156088 ~ 4160062 (+)
G50448 NA other downstream 1016084 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 1355359 7296886 ~ 7315850 (+)
G50583 NA other downstream 1992302 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 2337326 8278853 ~ 8324778 (+)
G50747 NA other downstream 2508639 8450166 ~ 8666548 (+)

Expression


Co-expression Network