G50448


Basic Information

Item Value
gene id G50448
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6957611 ~ 7018125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63090
aggGGGAACAACAGTTGGATTTGCCTCTTACACTGGTTTGGAATCTGTGTTAAGTGCAAAATTCCTTCAGAACTCTCAAAACAATGCATCTCCCCGAATGAACTCACAGATAGTAACTGTGGTCATCGGCCAAAAGAAGAATCAGAACCTTTCTCAGCCTATTCATATAACTTTCAAGCACAATCAAATCAAAGGTGAAAGAGAAACTGTTCAGTGTGTCTACTGGAATCATCAAGGAAATGACAGCTCCTGGTCCACAGAGGGCTGCAAAGAAGTTCATTccaatacaacacacactgtcTGCAGCCTTACCCACCTCAGCAGCTTTGCTTTAATCATGGCAACTGATGAATCACAGATCGAAGATGATTCCACTCTGGAAATGATCACCTACATATTTTTGAGCATAGCCCTCATTTGTCTCTGCCTTGCAAtccttacatttgtattgtgtgtttcaGTCCATAAAGGAAATACTGCCCTTCACTTGCATTTGAGCCTTTGTCTTTTTATGGCGAACCTTCTCTTTTTAGTTGGAGTTGGAGtatctaaaacagaaaacaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63090 True 566 TUCP 0.41 3 6957611 7018125

Neighbor

gene id symbol gene type direction distance location
AMCG00008629 NA coding upstream 208726 6747711 ~ 6748885 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding upstream 238520 6692745 ~ 6719091 (+)
AMCG00008619 NA coding upstream 594581 6305726 ~ 6363030 (+)
AMCG00008618 NA coding upstream 749860 6188494 ~ 6207751 (+)
AMCG00008617 NA coding upstream 838259 6108963 ~ 6119352 (+)
AMCG00008641 NA coding downstream 336140 7354265 ~ 7354886 (+)
AMCG00008640 NA coding downstream 353903 7372028 ~ 7376143 (+)
AMCG00008645 gdf11 coding downstream 397674 7415799 ~ 7416230 (+)
AMCG00008643 gdf11,LOC108254821,LOC106513268,LOC107562248,LOC107573429,LOC107683628,LOC107385665 coding downstream 469045 7487170 ~ 7496005 (+)
AMCG00008644 NA coding downstream 525595 7543720 ~ 7552782 (+)
G50367 NA non-coding upstream 306272 6646950 ~ 6651339 (+)
G50362 NA non-coding upstream 327965 6629438 ~ 6629646 (+)
G50346 NA non-coding upstream 439020 6490657 ~ 6518591 (+)
G50342 NA non-coding upstream 582577 6374665 ~ 6375034 (+)
G50340 NA non-coding upstream 584700 6372432 ~ 6372911 (+)
G50450 NA non-coding downstream 4336 7022461 ~ 7166940 (+)
G50451 NA non-coding downstream 22796 7040921 ~ 7050362 (+)
G50458 NA non-coding downstream 194621 7212746 ~ 7219181 (+)
G50459 NA non-coding downstream 202615 7220740 ~ 7222856 (+)
G50461 NA non-coding downstream 215295 7233420 ~ 7248042 (+)
G50243 NA other upstream 1214861 5738541 ~ 5742750 (+)
G50215 NA other upstream 1360812 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 2384737 4561991 ~ 4572874 (+)
G49982 NA other upstream 2792128 4162058 ~ 4165483 (+)
G49980 NA other upstream 2797549 4156088 ~ 4160062 (+)
AMCG00008639 NA other downstream 278761 7296886 ~ 7315850 (+)
G50583 NA other downstream 915704 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 1260728 8278853 ~ 8324778 (+)
G50747 NA other downstream 1432041 8450166 ~ 8666548 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 2063702 9081827 ~ 9087967 (+)

Expression


Co-expression Network