G50506


Basic Information

Item Value
gene id G50506
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 7379048 ~ 7379506 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63177
TTCTCCTTTATTAAAAGCACAGGTGCCAAAGACAAATAAATCCACAGTTTCAGTTCAAGTCACATTTCACCCAGTTAACTTAGCAATCAGTGAATTGACATACTGTTTATAAAGCAAAACCCTAATATAACAGTCCAATTCAAGTTCCCCATATCTAGCACCATACTGTATGTACAGCTcatcaatatattatataaataaaaagctgaaagCTTTTTTAACCATGTATATGGGaagaaacaaatcacatttttactttaagaaaggaaaagcatttacaaaaagcacaaaacaaaaataaaaaagcacagtgaaatgtaaaccttgatttaattttacacatATTATAAGAATTccccaaaacaagaaaattCCAAACCTGAGTTCATCTGGTACCACTAAAAccatacaaaaatgtatgtacagtttACAAATTATTCCTCtccacacacaaatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63177 True 459 lncRNA 0.30 1 7379048 7379506

Neighbor

gene id symbol gene type direction distance location
AMCG00008640 NA coding upstream 2905 7372028 ~ 7376143 (+)
AMCG00008641 NA coding upstream 24162 7354265 ~ 7354886 (+)
AMCG00008629 NA coding upstream 630163 6747711 ~ 6748885 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding upstream 659957 6692745 ~ 6719091 (+)
AMCG00008619 NA coding upstream 1016018 6305726 ~ 6363030 (+)
AMCG00008645 gdf11 coding downstream 36293 7415799 ~ 7416230 (+)
AMCG00008643 gdf11,LOC108254821,LOC106513268,LOC107562248,LOC107573429,LOC107683628,LOC107385665 coding downstream 107664 7487170 ~ 7496005 (+)
AMCG00008644 NA coding downstream 164214 7543720 ~ 7552782 (+)
AMCG00008648 NA coding downstream 243124 7622630 ~ 7669344 (+)
AMCG00008649 LOC106565510,LOC106583272,LOC108424584 coding downstream 342735 7722241 ~ 7725184 (+)
G50461 NA non-coding upstream 131006 7233420 ~ 7248042 (+)
G50459 NA non-coding upstream 156192 7220740 ~ 7222856 (+)
G50458 NA non-coding upstream 159867 7212746 ~ 7219181 (+)
G50450 NA non-coding upstream 212108 7022461 ~ 7166940 (+)
G50451 NA non-coding upstream 328686 7040921 ~ 7050362 (+)
G50534 NA non-coding downstream 153468 7532974 ~ 7542850 (+)
G50546 NA non-coding downstream 294635 7674141 ~ 7676185 (+)
G50561 NA non-coding downstream 313430 7692936 ~ 7828902 (+)
G50563 NA non-coding downstream 359689 7739195 ~ 7740429 (+)
G50571 NA non-coding downstream 445377 7824883 ~ 7826540 (+)
AMCG00008639 NA other upstream 63198 7296886 ~ 7315850 (+)
G50448 NA other upstream 360923 6957611 ~ 7018125 (+)
G50243 NA other upstream 1636298 5738541 ~ 5742750 (+)
G50215 NA other upstream 1782249 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 2806174 4561991 ~ 4572874 (+)
G50583 NA other downstream 554323 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 899347 8278853 ~ 8324778 (+)
G50747 NA other downstream 1070660 8450166 ~ 8666548 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 1702321 9081827 ~ 9087967 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other downstream 1737169 9116675 ~ 9122812 (+)

Expression


Co-expression Network