G50602


Basic Information

Item Value
gene id G50602
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 7901335 ~ 7902606 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63287
GGTTTGCTTTTGGTTGACACCAATACAGCTGCCCCTATTACCACAATGCATGAGGAAGGATCAGGTTATCCTGAGACTGAAACCCCTACAACTAAACCTCCTACCTCAAACACAGCTCCCACTGTGTCCTCAAatAATGTGGCTGAAACCGTAACAGCTCCCACAAGCAATACACCTACAGTTCTAGTGACAGACACCACCGCCACAACAACTACTGTAACTACAGCTCTAgctacaacaaacaaaataacaaacccAATACTTATAACAGAAGGAAAATATCTCAATGACACTAACACAACTACAGCAACATCTACAACCCAAACATCCTCAGCTGCAACGTCAATAGAAACAACTGAATTTCCACCTATAATGCCGGTCATCGCTGTCCTGAGACTGGAGTTCAACAGCAATAACCCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63287 True 423 TUCP 0.44 4 7901335 7902606

Neighbor

gene id symbol gene type direction distance location
AMCG00008655 NA coding downstream 39799 7819151 ~ 7861536 (-)
AMCG00008650 tmbim6 coding downstream 155031 7728099 ~ 7746304 (-)
AMCG00008646 NA coding downstream 358448 7527549 ~ 7542887 (-)
AMCG00008647 gdf11 coding downstream 383493 7434320 ~ 7517842 (-)
AMCG00008642 ccnt1,ccnt2,LOC102787965 coding downstream 498515 7387052 ~ 7402820 (-)
AMCG00008654 NA coding upstream 134426 8037032 ~ 8075024 (-)
AMCG00008658 LOC103376555,LOC104932002 coding upstream 237445 8140051 ~ 8146234 (-)
AMCG00008660 timeless coding upstream 289646 8192252 ~ 8207177 (-)
AMCG00008659 NA coding upstream 329073 8231679 ~ 8244280 (-)
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding upstream 349248 8251854 ~ 8273688 (-)
G50560 NA non-coding downstream 225149 7668848 ~ 7676186 (-)
G50558 NA non-coding downstream 238893 7662152 ~ 7662442 (-)
G50557 NA non-coding downstream 243944 7654080 ~ 7657391 (-)
G50514 NA non-coding downstream 521848 7379038 ~ 7379487 (-)
G50496 NA non-coding downstream 534405 7366625 ~ 7366930 (-)
G50611 NA non-coding upstream 69996 7972602 ~ 7973752 (-)
G50615 NA non-coding upstream 82134 7984740 ~ 7984951 (-)
G50632 NA non-coding upstream 103032 8005638 ~ 8104803 (-)
G50646 NA non-coding upstream 196166 8098772 ~ 8099445 (-)
G50647 NA non-coding upstream 202766 8105372 ~ 8105602 (-)
G50476 NA other downstream 749863 6947889 ~ 7151472 (-)
AMCG00008634 NA other downstream 968246 6920707 ~ 6933089 (-)
AMCG00008633 prkaca,LOC108429687 other downstream 1015648 6839077 ~ 6885687 (-)
G50267 LOC107575789 other downstream 2015885 5748890 ~ 5885450 (-)
AMCG00008608 NA other downstream 2107340 5786620 ~ 5793995 (-)
G50656 NA other upstream 231975 8134581 ~ 8135414 (-)
AMCG00008662 NA other upstream 280323 8182929 ~ 8190177 (-)
G50710 NA other upstream 366417 8269023 ~ 8269326 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other upstream 367718 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other upstream 378609 8281215 ~ 8293486 (-)

Expression


Co-expression Network