G50611


Basic Information

Item Value
gene id G50611
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 7972602 ~ 7973752 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63298
ctctctctctctttctcactaaTTCCATAGTGTCACATCAAACATAATCTATGCTAGTGTGGTGTACAAGTTCAAAGATGGAGATATTGCCAACCCCAGCACATTCCTGTCTGCGCTCTTGGAAGTCAGCGACAAAGGTAGCCTGACCCTAATCTCCACCACACCACCTTCACCTGTCCTGCTGCCCGTAGTGACACCCACCCCTGGCAGCAGAGATCCTGGCATCTGGGGTGTCGCCATTGCTGTCCCCATCGGGGTTGCCCTCATCCTGCTACCTTGCTGGATCGCGCTCTGTtgtgtgctgtgtggctGCTGTGCGGGACTCAGGAGGAGATGGCAGCGAAGGCGATCCTATCCAGTGCAATACACTACCAGAAACGGCCTGTTCTAAACAGGTAAGACAGTGGACAAGTCTAAAACTGAGCGAAATATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63298 True 434 lncRNA 0.52 3 7972602 7973752

Neighbor

gene id symbol gene type direction distance location
AMCG00008655 NA coding downstream 111066 7819151 ~ 7861536 (-)
AMCG00008650 tmbim6 coding downstream 226298 7728099 ~ 7746304 (-)
AMCG00008646 NA coding downstream 429715 7527549 ~ 7542887 (-)
AMCG00008647 gdf11 coding downstream 454760 7434320 ~ 7517842 (-)
AMCG00008642 ccnt1,ccnt2,LOC102787965 coding downstream 569782 7387052 ~ 7402820 (-)
AMCG00008654 NA coding upstream 63280 8037032 ~ 8075024 (-)
AMCG00008658 LOC103376555,LOC104932002 coding upstream 166299 8140051 ~ 8146234 (-)
AMCG00008660 timeless coding upstream 218500 8192252 ~ 8207177 (-)
AMCG00008659 NA coding upstream 257927 8231679 ~ 8244280 (-)
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding upstream 278102 8251854 ~ 8273688 (-)
G50560 NA non-coding downstream 296416 7668848 ~ 7676186 (-)
G50558 NA non-coding downstream 310160 7662152 ~ 7662442 (-)
G50557 NA non-coding downstream 315211 7654080 ~ 7657391 (-)
G50514 NA non-coding downstream 593115 7379038 ~ 7379487 (-)
G50496 NA non-coding downstream 605672 7366625 ~ 7366930 (-)
G50615 NA non-coding upstream 10988 7984740 ~ 7984951 (-)
G50632 NA non-coding upstream 31886 8005638 ~ 8104803 (-)
G50646 NA non-coding upstream 125020 8098772 ~ 8099445 (-)
G50647 NA non-coding upstream 131620 8105372 ~ 8105602 (-)
G50657 NA non-coding upstream 163723 8137475 ~ 8138061 (-)
G50602 NA other downstream 69996 7901335 ~ 7902606 (-)
G50476 NA other downstream 821130 6947889 ~ 7151472 (-)
AMCG00008634 NA other downstream 1039513 6920707 ~ 6933089 (-)
AMCG00008633 prkaca,LOC108429687 other downstream 1086915 6839077 ~ 6885687 (-)
G50267 LOC107575789 other downstream 2087152 5748890 ~ 5885450 (-)
G50656 NA other upstream 160829 8134581 ~ 8135414 (-)
AMCG00008662 NA other upstream 209177 8182929 ~ 8190177 (-)
G50710 NA other upstream 295271 8269023 ~ 8269326 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other upstream 296572 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other upstream 307463 8281215 ~ 8293486 (-)

Expression


Co-expression Network