G50615


Basic Information

Item Value
gene id G50615
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 7984740 ~ 7984951 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63303
tctcacctggttctcctcctacctcagcgaccggacctaccaagtgacatggcgaggttcctcatccaccccccaacctctcctcacaggcgtaccccaaggctccgtcctgggccccctcctgttctctctctacactcgctccctgggccccctcatcgcatcccatggtttctcctaccacttctatgctgatgatgcccagatcttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63303 True 212 lncRNA 0.60 1 7984740 7984951

Neighbor

gene id symbol gene type direction distance location
AMCG00008655 NA coding downstream 123204 7819151 ~ 7861536 (-)
AMCG00008650 tmbim6 coding downstream 238436 7728099 ~ 7746304 (-)
AMCG00008646 NA coding downstream 441853 7527549 ~ 7542887 (-)
AMCG00008647 gdf11 coding downstream 466898 7434320 ~ 7517842 (-)
AMCG00008642 ccnt1,ccnt2,LOC102787965 coding downstream 581920 7387052 ~ 7402820 (-)
AMCG00008654 NA coding upstream 52081 8037032 ~ 8075024 (-)
AMCG00008658 LOC103376555,LOC104932002 coding upstream 155100 8140051 ~ 8146234 (-)
AMCG00008660 timeless coding upstream 207301 8192252 ~ 8207177 (-)
AMCG00008659 NA coding upstream 246728 8231679 ~ 8244280 (-)
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding upstream 266903 8251854 ~ 8273688 (-)
G50611 NA non-coding downstream 10988 7972602 ~ 7973752 (-)
G50560 NA non-coding downstream 308554 7668848 ~ 7676186 (-)
G50558 NA non-coding downstream 322298 7662152 ~ 7662442 (-)
G50557 NA non-coding downstream 327349 7654080 ~ 7657391 (-)
G50514 NA non-coding downstream 605253 7379038 ~ 7379487 (-)
G50632 NA non-coding upstream 20687 8005638 ~ 8104803 (-)
G50646 NA non-coding upstream 113821 8098772 ~ 8099445 (-)
G50647 NA non-coding upstream 120421 8105372 ~ 8105602 (-)
G50657 NA non-coding upstream 152524 8137475 ~ 8138061 (-)
G50711 NA non-coding upstream 293801 8278752 ~ 8324775 (-)
G50602 NA other downstream 82134 7901335 ~ 7902606 (-)
G50476 NA other downstream 833268 6947889 ~ 7151472 (-)
AMCG00008634 NA other downstream 1051651 6920707 ~ 6933089 (-)
AMCG00008633 prkaca,LOC108429687 other downstream 1099053 6839077 ~ 6885687 (-)
AMCG00008608 NA other downstream 2190745 5786620 ~ 5793995 (-)
G50656 NA other upstream 149630 8134581 ~ 8135414 (-)
AMCG00008662 NA other upstream 197978 8182929 ~ 8190177 (-)
G50710 NA other upstream 284072 8269023 ~ 8269326 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other upstream 285373 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other upstream 296264 8281215 ~ 8293486 (-)

Expression


Co-expression Network