G50657


Basic Information

Item Value
gene id G50657
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8137475 ~ 8138061 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63355
ttggtattatttattgttattttatgaaaaacGTACAACTCTGATACTAATCATTTTATAATGATAAAGCAGTTATCCAGTAACTGCGGCAGTGCGAGCGATAGTCATCGCCCTTCGCTAGTGACATAAATCGTTTGCAAGGACATCACCTATAGATTtgtgttcatttacattttaagtccACTTCCAGGCAAGTCATGAGTTGAgaaatttacatttgatttgaaaaacaaacgcacacacaaataaactacAGTTGATGACCCTGAATATGTGGAAGACTCCATACCAGATGGCCTTTTATaagaataacacaaaatacaaaaacatgcttTAGTTAAGGACCTAATaaccttaatttatttaatgaaaaatatccTCAGAACAGAACGGTGAATCCTAGCACAAACGTCTGACTACTAAAGCTTTAAAACATCAGCTGATGGTAGCAAACGtttcaaaaccacaagaagCGTATACCCTTAGTTTAAACCGGAGCAATAGAAAATACTGGCAAAGTCCTTATGAAGGAGGTGAGTCACAATGTTACTCTAGTCAGTGGTTACACAATAGTAGTGCTGGTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63355 True 587 lncRNA 0.36 1 8137475 8138061

Neighbor

gene id symbol gene type direction distance location
AMCG00008654 NA coding downstream 62451 8037032 ~ 8075024 (-)
AMCG00008655 NA coding downstream 275939 7819151 ~ 7861536 (-)
AMCG00008650 tmbim6 coding downstream 391171 7728099 ~ 7746304 (-)
AMCG00008646 NA coding downstream 594588 7527549 ~ 7542887 (-)
AMCG00008647 gdf11 coding downstream 619633 7434320 ~ 7517842 (-)
AMCG00008658 LOC103376555,LOC104932002 coding upstream 1990 8140051 ~ 8146234 (-)
AMCG00008660 timeless coding upstream 54191 8192252 ~ 8207177 (-)
AMCG00008659 NA coding upstream 93618 8231679 ~ 8244280 (-)
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding upstream 113793 8251854 ~ 8273688 (-)
AMCG00008669 LOC106456382,LOC108433351,LOC103385219,LOC103467923,LOC101079871 coding upstream 178566 8316627 ~ 8320297 (-)
G50647 NA non-coding downstream 31873 8105372 ~ 8105602 (-)
G50632 NA non-coding downstream 32672 8005638 ~ 8104803 (-)
G50646 NA non-coding downstream 38030 8098772 ~ 8099445 (-)
G50615 NA non-coding downstream 152524 7984740 ~ 7984951 (-)
G50611 NA non-coding downstream 163723 7972602 ~ 7973752 (-)
G50711 NA non-coding upstream 140691 8278752 ~ 8324775 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding upstream 219389 8357450 ~ 8360962 (-)
G50740 NA non-coding upstream 234445 8372506 ~ 8384007 (-)
G50784 NA non-coding upstream 435953 8574014 ~ 8574338 (-)
G50836 NA non-coding upstream 699298 8837359 ~ 8840655 (-)
G50656 NA other downstream 2061 8134581 ~ 8135414 (-)
G50602 NA other downstream 234869 7901335 ~ 7902606 (-)
G50476 NA other downstream 986003 6947889 ~ 7151472 (-)
AMCG00008634 NA other downstream 1204386 6920707 ~ 6933089 (-)
AMCG00008633 prkaca,LOC108429687 other downstream 1251788 6839077 ~ 6885687 (-)
AMCG00008662 NA other upstream 44868 8182929 ~ 8190177 (-)
G50710 NA other upstream 130962 8269023 ~ 8269326 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other upstream 132263 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other upstream 143154 8281215 ~ 8293486 (-)
G50739 NA other upstream 229855 8367916 ~ 8371330 (-)

Expression


Co-expression Network