G50739


Basic Information

Item Value
gene id G50739
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8367916 ~ 8371330 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63463
CTTCCATCTGATAGCAAAGATCAACATCAAATTTCTACCAAAAAAAGTGTGATTGTAGATATGCACGTCCATTTCCCCTTAGCACTTAAAACGTACGTGGCACTTTAAcatcaaggaaaaaaacaatagctgAGCAATAACTTTTAATCGTCAGTCACAGTTGCATATGTCAACATATTACTGTTGGCGTGCATATTAGCGAATGAGTGTGTTTTAGTGGGCAAGcgcatatatattattatttgtaactaGACTGTAAATATTagtgtgcatttatttgtattgataagCTATTGATTGTATTGATGTGCATATTATTGAGTAAGTGGGTCTATGAAAGCCACTGTATTGTGCCCATGTATAAGTGAATCTAATAAATGTCTATTGTGTGTATTAGAGTGTGTATTTGTAACCAAATGTCTATATAAATCTCTCTGTGTAATAGTGAGTGTCTATATGAATGTCACTGTGTAGTAGTTGTAATTAAACTAGCATTtcactgcattgtgtgtgtgtgcgtgtattaACAAGGAAGAGATATAGAAGTGTATATAAACGTCTGTATTATGCACATGTATTTGTGAGCAAGTGTGTCTTTAATcgtctgtcttgtgtgtgtgtgtgtttcacagcAAACATGTATATATGCTGGACAAAGTCTGTCCATATGTCTGTATTGTAagcattctgtgtgtgtgcgtgtctacTGGTGAGCAAGTGTGTCTATATGCACCAGTCTCACCTCCAATGGTGCTCTCCTGGTATTCCTGGAATTGGCCCTTGACGAATCGCAGCACTAGGCTGGACTTGCCCACCGCCGACTCGCCGAGCAGCACCAACTTGAACTGGCACACCTTACCGGGCTGGGGCTGGCCATTGGGCCGCGACGGGCGCCCTGCCATAGCCAATGTTCAGGGACGGTGGTGTGGAGGAGGGGAGCGGGTGGTGTGGAGATgacaggggagggggggtgggggggatgggaGGGACAATGACCACGGGTTGGGGGCGAAAGGGGCTCCTCCAACTGAGAAGCTGGCCGGATCTTGTTGCCGGAAAAAAACCTGTCGCTCCgtttccctctctcttgccCTCTCTCCAATCTTTTCGCTGTCGGCGCTGCGGAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63463 True 1129 TUCP 0.45 2 8367916 8371330

Neighbor

gene id symbol gene type direction distance location
AMCG00008666 NA coding downstream 11363 8332841 ~ 8356553 (-)
AMCG00008667 NA coding downstream 35094 8329899 ~ 8332822 (-)
AMCG00008669 LOC106456382,LOC108433351,LOC103385219,LOC103467923,LOC101079871 coding downstream 47619 8316627 ~ 8320297 (-)
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding downstream 94228 8251854 ~ 8273688 (-)
AMCG00008659 NA coding downstream 123636 8231679 ~ 8244280 (-)
AMCG00008673 NA coding upstream 85187 8456517 ~ 8457954 (-)
AMCG00008672 NA coding upstream 131370 8502700 ~ 8504696 (-)
AMCG00008674 NA coding upstream 179239 8550569 ~ 8565844 (-)
AMCG00008681 NA coding upstream 264470 8635800 ~ 8658560 (-)
AMCG00008682 NA coding upstream 330448 8701778 ~ 8717326 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 6954 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 43141 8278752 ~ 8324775 (-)
G50657 NA non-coding downstream 229855 8137475 ~ 8138061 (-)
G50647 NA non-coding downstream 262314 8105372 ~ 8105602 (-)
G50632 NA non-coding downstream 263113 8005638 ~ 8104803 (-)
G50740 NA non-coding upstream 1176 8372506 ~ 8384007 (-)
G50784 NA non-coding upstream 202684 8574014 ~ 8574338 (-)
G50836 NA non-coding upstream 466029 8837359 ~ 8840655 (-)
G50915 NA non-coding upstream 773014 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 1005242 9376572 ~ 9379452 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 73562 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 74430 8281215 ~ 8293486 (-)
G50710 NA other downstream 98590 8269023 ~ 8269326 (-)
AMCG00008662 NA other downstream 177739 8182929 ~ 8190177 (-)
G50656 NA other downstream 232502 8134581 ~ 8135414 (-)
G50788 NA other upstream 285398 8656728 ~ 8660017 (-)
G51008 NA other upstream 1019513 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1966995 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 2189536 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 2299619 10670949 ~ 10718201 (-)

Expression


Co-expression Network