G50747


Basic Information

Item Value
gene id G50747
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8450166 ~ 8666548 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63473
CCTTAGGTAGCCATTTATCTGCTGCAAACTTGTAAACAACAAACCTCCTCTCCTTTCCTTGCCATTTTTTTACACCATCCGTGCCTCAATGCGGAGATAGAGCGTTCTGAGGCTCAGAGTATGCGAATGCTCAGCACGTCGAGGACAATGAGAGCTCTCCTGGTGTGTCACAGGGTTTGGGAGGGGCTCATCCAGTCCATCCATGCCTGCACCATCCCCCGTTTCAAGAAGACCAGCTGTATCATGGcAGGTGCAGTCCGTGATAGGAGCACACAGAGCCAAACCCCGCTGCTGACTGCCACGCCCAGCCGTGCTCTTGTGGACCAGCCAGTAGAAATTGGTATCTGGCATCTACCTCCGAATAAGCCATTCACAGTGCGGTCCCACCTGCGCAGTGAGGATGGGGATCTGTGGGAAGCATTCTCGTATTACCGCAGTGACCAGAAGGGGACAGTGATCTTGTCCCGGGACCAGTCTTTGGGCGGTTCCTACAGCGGCCTGGAACCCATGGGTTTGTTCTGgagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63473 True 526 TUCP 0.55 4 8450166 8666548

Neighbor

gene id symbol gene type direction distance location
AMCG00008670 rab5b,rab5c,LOC108245972,LOC103393176,LOC107381932 coding upstream 66203 8369707 ~ 8383963 (+)
AMCG00008671 cdk2,LOC107570445,LOC107683630 coding upstream 85623 8357428 ~ 8364543 (+)
AMCG00008665 LOC103367933,LOC106456382,LOC108433351,LOC107714908 coding upstream 156649 8276771 ~ 8293517 (+)
AMCG00008663 LOC107714908 coding upstream 176448 8244041 ~ 8273718 (+)
AMCG00008656 NA coding upstream 312105 8125999 ~ 8138061 (+)
AMCG00008678 NA coding downstream 2053 8668601 ~ 8669729 (+)
AMCG00008675 NA coding downstream 13785 8680333 ~ 8693830 (+)
AMCG00008677 NA coding downstream 28294 8694842 ~ 8699781 (+)
AMCG00008676 NA coding downstream 57525 8724073 ~ 8727731 (+)
AMCG00008679 NA coding downstream 97783 8764331 ~ 8771848 (+)
G50698 NA non-coding upstream 180840 8269007 ~ 8269326 (+)
G50692 NA non-coding upstream 203334 8246577 ~ 8246832 (+)
G50668 NA non-coding upstream 259381 8189825 ~ 8190785 (+)
G50627 NA non-coding upstream 375162 8068760 ~ 8075004 (+)
G50617 NA non-coding upstream 454105 7995755 ~ 7996061 (+)
G50823 NA non-coding downstream 136658 8803206 ~ 8809391 (+)
G50878 LOC100846954 non-coding downstream 327988 8994536 ~ 8994903 (+)
G50929 NA non-coding downstream 525229 9191777 ~ 9192377 (+)
G50930 NA non-coding downstream 525982 9192530 ~ 9192919 (+)
G50931 NA non-coding downstream 526467 9193015 ~ 9193685 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other upstream 125388 8278853 ~ 8324778 (+)
G50583 NA other upstream 510395 7933829 ~ 7939771 (+)
AMCG00008639 NA other upstream 1134316 7296886 ~ 7315850 (+)
G50448 NA other upstream 1432041 6957611 ~ 7018125 (+)
G50243 NA other upstream 2707416 5738541 ~ 5742750 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 415279 9081827 ~ 9087967 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other downstream 450127 9116675 ~ 9122812 (+)
AMCG00008710 NA other downstream 643538 9310086 ~ 9316151 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other downstream 688544 9355092 ~ 9379579 (+)
AMCG00008725 NA other downstream 1248946 9915494 ~ 9937752 (+)

Expression


Co-expression Network