G51002


Basic Information

Item Value
gene id G51002
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9380751 ~ 9381754 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63788
CAGGGCGTGGGTTCCTCTTCTTTTCTCCCGTACAATatattattcaatatatttctCGCTGcgtctttctttcttctttcagaGCTTATCATGGGAGACGACTGCCGTCTATACTAGGGCGAGTCCTGCTGCTAGGAAAAACGCTTAGCTTTGGAGAAAAGAGaatgtaatgtatgtgtgtgtggacgTATAGGCTATATATGCGCCGGTTCTTCCACTAGTTCGGTTgcaacattgaaaaaaataaatgcacatctacaaaagagaaaaaaaactgtccgGTTGTCAATTtaaacagtgctgtgtgtggttAGTAATACCATTaatgagaaatgttttaaagcGATTAACCTGGGGCAGTCGGGAGAGAGGAGGACTGAgtgtattgtatatgtatacgtgtttttttattattgttttagttatAAAAAGGAAGGGTGGTTGCTTGGAAAAAAATATCGACTTCCCCCCGATTCCTTTAATATGCCTGCATATCGAACAATCCGCTTCGCCCGTTGTGTGCGTTGCTGCCTGTGTGACCCGGGCGGCTTTATCTTTTTGGTGTacgttttattttgattttttttttcgccGGTGTAGCTCGTAAACCCCCTTAAGTCCGTGGTTTCCTTTCcgttacaaaaatgtatgttcCAGATCTAGGCGGATTGCAGCCCTCCGTCTCCCTCCAGCTGCCCCGGTTTGTTACAATGTAACAATAGGGCTTGGAATGCTATACTGTAGCCATATATACCCCGAGTGACATCACGGGTACAGTGCACACATGCCGGCCGCGGAGGAAGTCGGGAGATGTAGTCTATGCGGCTTAACCACGGACAAAGACCTGCTATTTAGCCGTTCATTCCTATTGAAGCTAGATCAACGGAGTGGAATTATTTactgatattattttttaccaaaGCGCTCTCTTATTCGACTTTagactttaaaaatgcataaataaaaggcTGATTAGAATAGTACAGCTATTGCATTGGCTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63788 True 1004 lncRNA 0.42 1 9380751 9381754

Neighbor

gene id symbol gene type direction distance location
AMCG00008709 dazap2,LOC106572518,LOC106567170 coding downstream 54032 9321577 ~ 9326719 (-)
AMCG00008703 NA coding downstream 93064 9283550 ~ 9287687 (-)
AMCG00008704 NA coding downstream 125097 9232126 ~ 9255654 (-)
AMCG00008702 NA coding downstream 151292 9223114 ~ 9229459 (-)
AMCG00008705 cs,LOC107707042,LOC107715034,LOC107671863 coding downstream 175359 9197433 ~ 9205392 (-)
AMCG00008713 NA coding upstream 31944 9413698 ~ 9417891 (-)
AMCG00008717 NA coding upstream 150079 9531833 ~ 9554934 (-)
AMCG00008719 NA coding upstream 181146 9562900 ~ 9565171 (-)
AMCG00008718 bloc1s1,LOC107573571 coding upstream 197635 9579389 ~ 9587169 (-)
AMCG00008723 NA coding upstream 358530 9740284 ~ 9757947 (-)
G50999 NA non-coding downstream 1299 9376572 ~ 9379452 (-)
G50915 NA non-coding downstream 230813 9144344 ~ 9149938 (-)
G50836 NA non-coding downstream 540096 8837359 ~ 8840655 (-)
G50784 NA non-coding downstream 806413 8574014 ~ 8574338 (-)
G50740 NA non-coding downstream 996744 8372506 ~ 8384007 (-)
G51004 NA non-coding upstream 6504 9388258 ~ 9388608 (-)
G51005 NA non-coding upstream 7070 9388824 ~ 9389048 (-)
G51006 NA non-coding upstream 7457 9389211 ~ 9389570 (-)
G51007 csrnp2,LOC106567166,LOC107594006,LOC107715040 non-coding upstream 8030 9389784 ~ 9390161 (-)
G51015 NA non-coding upstream 28005 9409759 ~ 9410974 (-)
G50788 NA other downstream 720734 8656728 ~ 8660017 (-)
G50739 NA other downstream 1009421 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 1086397 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 1087265 8281215 ~ 8293486 (-)
G50710 NA other downstream 1111425 8269023 ~ 8269326 (-)
G51008 NA other upstream 9089 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 956571 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1179112 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1289195 10670949 ~ 10718201 (-)
G51241 NA other upstream 1294002 10675756 ~ 10712485 (-)

Expression


Co-expression Network