G51065


Basic Information

Item Value
gene id G51065
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9640756 ~ 9715167 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63867
TGAACGGTGGCTTCTGACAGGTCTTGGATGGTACTGATATTGAACAAGGGAAGATCCATTCTAGGTCTGTGAAGAGAGATCCTATTTGATCTGGACCAGAAGGTCACAGCGCCCCTGAAACTGAGACCTTGTGTATTGTGGACGAGACCTCTACTGGCTCATAATGAATCTGTGAGGAGCATCGCCGTTGGGTTTAACTAAGATCTGAGTGCCAGTTTCTGCAGACTAAACACTGGTAAATGGTGCGAATGCACTTTTTGGATTCTGCCCAACAGGGGTCCTGTTCTAGCTGCACTTGTCTTTATTCTCTATATATcactgtcttttttttttttcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63867 True 339 lncRNA 0.45 2 9640756 9715167

Neighbor

gene id symbol gene type direction distance location
AMCG00008720 NA coding upstream 1510 9621109 ~ 9639246 (+)
AMCG00008714 NA coding upstream 103299 9531791 ~ 9537457 (+)
AMCG00008716 NA coding upstream 111084 9527898 ~ 9529672 (+)
AMCG00008715 NA coding upstream 115069 9488495 ~ 9525687 (+)
AMCG00008711 NA coding upstream 231998 9400486 ~ 9408758 (+)
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding downstream 146652 9861819 ~ 9910773 (+)
AMCG00008736 NA coding downstream 502171 10217338 ~ 10219366 (+)
AMCG00008738 NA coding downstream 543279 10258446 ~ 10275211 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding downstream 561783 10276950 ~ 10285158 (+)
AMCG00008742 LOC107709223 coding downstream 596415 10311582 ~ 10312097 (+)
G51000 NA non-coding upstream 242387 9392027 ~ 9398369 (+)
G50983 NA non-coding upstream 286351 9352978 ~ 9354405 (+)
G50932 NA non-coding upstream 446118 9194404 ~ 9194638 (+)
G50931 NA non-coding upstream 447071 9193015 ~ 9193685 (+)
G50930 NA non-coding upstream 447837 9192530 ~ 9192919 (+)
G51094 NA non-coding downstream 76971 9792138 ~ 9794219 (+)
G51129 NA non-coding downstream 258129 9973296 ~ 9975207 (+)
G51134 NA non-coding downstream 264231 9979398 ~ 10071199 (+)
G51157 NA non-coding downstream 505066 10220233 ~ 10222915 (+)
G51168 slc48a1,LOC106567162,LOC106572510,LOC105022284 non-coding downstream 560014 10275181 ~ 10281982 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 261177 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 324605 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 517944 9116675 ~ 9122812 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other upstream 552789 9081827 ~ 9087967 (+)
G50747 NA other upstream 974208 8450166 ~ 8666548 (+)
AMCG00008725 NA other downstream 200327 9915494 ~ 9937752 (+)
AMCG00008727 NA other downstream 212220 9927387 ~ 9931515 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 977210 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 1113401 10828568 ~ 10846436 (+)
G51297 NA other downstream 1269723 10984890 ~ 11040674 (+)

Expression


Co-expression Network