G51211


Basic Information

Item Value
gene id G51211
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10566737 ~ 10567811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64051
cCAAAAAGTTGAAGTCAGCTGCTCAAGAGCTTGGGTGGGGTGAAAAACCTGAGGGGGCAAGGCTGGCAAAGAGCCCCCGTGCCACTCACCCCAGCCCAGGATGTAGTACCAACACAGCTTCTGCTCCTCCACGAACACGGCCACAATGATGAGGGTGTGCAGGTAGATCCCTTCACACAGCATCCAGAAGTAATTGCAGCTGTTGGTGTAAAGGTTGAGGAACTGCAGCAGCTTGCAGCTGACCTGACGGTGCACACACAGCCATAGAGAATCAGGcaggaattaaaattaaataagtgttttagtATAAATAGTAATAGATCAGCTATTGGTAGGGCAGGTTTGATAAAGACTATAGTGTTGTTACTATAAACAAGGGCTGTCTGCATCTATGTCTGTCCATTTATGAACAGAACAGTGAAATTCAGGCACGACACTGCCCCCCACTATAGATACATTCTATACTTTAATAGGTCTTGTAAAGAGTGCCTCATATTGCATATGACATGTTTTGGTTGCACAAACTGAGAAATTAAGAGACACCACTTCCCACGATCTATTAACTTGTTATATATCACACATAAGGATTAgatgcagaaataaaaacatgtattgttgtTAAATTTAACAATCAACCCCCTTTCCATCTAAAAATTTATTGGCACAGGATCTGCTGCAACTGACAAAccaatctgttttgttttcatgctggttaaatgtaagaaaactaaaaaggaCATCCTGTGAAATGTGCACCACTTGTATTAAGTATCTTAAAACTTCGCAGGTAACTGAAGAATTTTGAAATCCTGATAATTCTTCACGCAGGATGATATTTATACACATGATTAGaggtataggaatgtttggaaatgctgccctgtgattggctgatgTCTGTTACGTGATTTTTATAGCCACGCTGGAGCTGCCGATCCAGAGGATCTCACCGGATTACTGAGTtcctggttgttgtttttggccatggtggagagagagatgacagTGAGGATGGAGTTGAGAATGAAGGAAAGGAAGAGGTTCTTGTGGAGAGAGATCCTCTGGCAGCTCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64051 True 1075 lncRNA 0.42 1 10566737 10567811

Neighbor

gene id symbol gene type direction distance location
AMCG00008742 LOC107709223 coding upstream 254640 10311582 ~ 10312097 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding upstream 281579 10276950 ~ 10285158 (+)
AMCG00008738 NA coding upstream 291526 10258446 ~ 10275211 (+)
AMCG00008736 NA coding upstream 347371 10217338 ~ 10219366 (+)
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding upstream 655964 9861819 ~ 9910773 (+)
AMCG00008745 NA coding downstream 43572 10611383 ~ 10618165 (+)
AMCG00008746 tmem106c,LOC107704621 coding downstream 50915 10618726 ~ 10625169 (+)
AMCG00008753 NA coding downstream 229960 10797771 ~ 10803672 (+)
AMCG00008754 NA coding downstream 327231 10895042 ~ 10906610 (+)
AMCG00008755 NA coding downstream 343316 10911127 ~ 10929774 (+)
G51210 NA non-coding upstream 1797 10564374 ~ 10564940 (+)
G51209 NA non-coding upstream 3638 10558639 ~ 10563099 (+)
G51168 slc48a1,LOC106567162,LOC106572510,LOC105022284 non-coding upstream 284755 10275181 ~ 10281982 (+)
G51157 NA non-coding upstream 343822 10220233 ~ 10222915 (+)
G51134 NA non-coding upstream 495538 9979398 ~ 10071199 (+)
G51212 NA non-coding downstream 1899 10569710 ~ 10569936 (+)
G51220 NA non-coding downstream 41935 10609746 ~ 10673784 (+)
G51226 NA non-coding downstream 107754 10675565 ~ 10712485 (+)
G51252 NA non-coding downstream 236095 10803906 ~ 10804107 (+)
G51265 NA non-coding downstream 300124 10867935 ~ 10910645 (+)
AMCG00008725 NA other upstream 628985 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 635222 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 1187158 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 1250586 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 1443925 9116675 ~ 9122812 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 124566 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 260757 10828568 ~ 10846436 (+)
G51297 NA other downstream 417079 10984890 ~ 11040674 (+)
G51445 NA other downstream 892552 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 1126843 11694654 ~ 11704413 (+)

Expression


Co-expression Network