G51220


Basic Information

Item Value
gene id G51220
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10609746 ~ 10673784 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64072
atcggaccTCCACtattttccccactcttcctcaccttctgctgatctctccatctcaatccccttggaatctacgaaactctctccttcttcttccgctaaaaaccAAGGAGTCACCCtggatcctgcgctctcctacacccagcacatcaccacgctgacacgcacctgcagattcttcctgagcaacatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgattcgacctttgtgacatggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64072 True 524 lncRNA 0.47 2 10609746 10673784

Neighbor

gene id symbol gene type direction distance location
AMCG00008742 LOC107709223 coding upstream 297649 10311582 ~ 10312097 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding upstream 324588 10276950 ~ 10285158 (+)
AMCG00008738 NA coding upstream 334535 10258446 ~ 10275211 (+)
AMCG00008736 NA coding upstream 390380 10217338 ~ 10219366 (+)
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding upstream 698973 9861819 ~ 9910773 (+)
AMCG00008753 NA coding downstream 123987 10797771 ~ 10803672 (+)
AMCG00008754 NA coding downstream 221258 10895042 ~ 10906610 (+)
AMCG00008755 NA coding downstream 237343 10911127 ~ 10929774 (+)
AMCG00008758 NA coding downstream 264455 10938239 ~ 10949947 (+)
AMCG00008757 NA coding downstream 276230 10950014 ~ 10950787 (+)
G51212 NA non-coding upstream 39810 10569710 ~ 10569936 (+)
G51211 NA non-coding upstream 41935 10566737 ~ 10567811 (+)
G51210 NA non-coding upstream 44806 10564374 ~ 10564940 (+)
G51209 NA non-coding upstream 46647 10558639 ~ 10563099 (+)
G51168 slc48a1,LOC106567162,LOC106572510,LOC105022284 non-coding upstream 327764 10275181 ~ 10281982 (+)
G51226 NA non-coding downstream 1781 10675565 ~ 10712485 (+)
G51252 NA non-coding downstream 130122 10803906 ~ 10804107 (+)
G51265 NA non-coding downstream 194151 10867935 ~ 10910645 (+)
G51283 NA non-coding downstream 277293 10951077 ~ 10953420 (+)
G51298 NA non-coding downstream 346432 11020216 ~ 11057436 (+)
AMCG00008725 NA other upstream 671994 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 678231 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 1230167 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 1293595 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 1486934 9116675 ~ 9122812 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 18593 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 154784 10828568 ~ 10846436 (+)
G51297 NA other downstream 311106 10984890 ~ 11040674 (+)
G51445 NA other downstream 786579 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 1020870 11694654 ~ 11704413 (+)

Expression


Co-expression Network