G51243


Basic Information

Item Value
gene id G51243
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10668711 ~ 10673855 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64116
CTTGTATTGTGAttagtttgttctgtttaaactATTACTTTCAATCATTCTTTTTGATAAAGATTTCTGctcaccatgtcacaaaggtcgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64116 True 406 lncRNA 0.40 2 10668711 10673855

Neighbor

gene id symbol gene type direction distance location
AMCG00008747 NA coding downstream 6520 10655011 ~ 10662191 (-)
AMCG00008743 LOC103045919,LOC106565233,LOC102299085,LOC100696631,LOC102216220 coding downstream 178945 10472530 ~ 10489766 (-)
AMCG00008739 NA coding downstream 410860 10221420 ~ 10257851 (-)
AMCG00008740 NA coding downstream 475446 10183119 ~ 10193265 (-)
AMCG00008734 NA coding downstream 603377 10059303 ~ 10065334 (-)
AMCG00008750 e3,LOC108429286,LOC106565226,LOC107705699 coding upstream 45637 10719492 ~ 10725176 (-)
AMCG00008751 krt8,LOC105023875,LOC107551542,LOC108411779,LOC107681390 coding upstream 90161 10764016 ~ 10771654 (-)
AMCG00008756 NA coding upstream 284729 10958584 ~ 10972379 (-)
AMCG00008765 NA coding upstream 330301 11004156 ~ 11011571 (-)
AMCG00008763 pcbp2,LOC100691124,LOC103464415,LOC106956729 coding upstream 347693 11021548 ~ 11035727 (-)
G51120 NA non-coding downstream 737609 9927245 ~ 9931102 (-)
G51103 LOC106928590,LOC103386378,LOC107385311,LOC106514726 non-coding downstream 757911 9909611 ~ 9910800 (-)
G51081 NA non-coding downstream 929455 9738646 ~ 9739256 (-)
G51057 NA non-coding downstream 1090328 9577268 ~ 9578383 (-)
G51044 NA non-coding downstream 1143024 9521354 ~ 9525687 (-)
G51251 krt18,LOC107727028,LOC107551541,LOC100692632,LOC102212553 non-coding upstream 127253 10801108 ~ 10803709 (-)
G51261 eif4b non-coding upstream 165251 10839106 ~ 10839672 (-)
G51344 NA non-coding upstream 383822 11057677 ~ 11140273 (-)
G51354 LOC100846954 non-coding upstream 489491 11163346 ~ 11164374 (-)
G51403 NA non-coding upstream 552632 11226487 ~ 11258218 (-)
AMCG00008744 NA other downstream 65338 10560866 ~ 10603373 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other downstream 298395 10338325 ~ 10370316 (-)
G51008 NA other downstream 1275484 9390843 ~ 9393227 (-)
G50788 NA other downstream 2008694 8656728 ~ 8660017 (-)
G50739 NA other downstream 2297381 8367916 ~ 8371330 (-)
G51241 NA other upstream 1901 10675756 ~ 10712485 (-)
G51250 NA other upstream 123777 10797632 ~ 10799154 (-)
AMCG00008777 dctn2,LOC102785932 other upstream 561787 11235642 ~ 11326359 (-)
AMCG00008815 NA other upstream 1927436 12601291 ~ 12605260 (-)
G51797 NA other upstream 2216956 12890811 ~ 12891597 (-)

Expression


Co-expression Network