G51250


Basic Information

Item Value
gene id G51250
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10797632 ~ 10799154 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64128
aaCCCTATATCATTTTTCGAgaggggaaaagagaaaaaaaaagttggcaTGAAACAGAAGGATTAGTGAAGCTCCTTGTTACTCTCTTCTTCTCTGAGGCCCTCTGTGTTCCTCCTGCAGACCAATATAGTGGATTTTCTGCTCAGGTCATCCAGCATGCTGTAGTAGTGGCTGTAGTCGTGGGCGGCCGGGCCACTCTTCTCCAGCACCTCTCGGATCTGCAGCTCCAGTTTGCTGTTGGCCTGCTCCAGGTTCCTCACCGTCTCCAGGTAGTTGGCCAGACGGTCGTTCAGGTTCTGCATGGTCTCCTTCTCGTTGCGGACCGCCGCTGAGCCACTGATCGACATCGAGGAAGAGAAGCCCCCTCCCTGGCCGAAGCCAGAGGATCCCCCCACCGTGGAGATCCGGGTGCCAAAGCCGCCTGATCCCGCGTACATGCTGGCCGAGCTGCTGAGGGGTCGGTTGAGCGACTGGGTTATCCTCTGGCTGGATACCATGGGGCGTGTAGACCTGACAGCGTAGGAAGTGGATCTAAAATCCATGATGACTGGGTAGATTAGCAAAACGTGAGTCagaggagcgagagagagctgGAGACTGCGACCTGGAGTGGCTGAGATGTGTGGACACAGAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64128 True 636 TUCP 0.56 2 10797632 10799154

Neighbor

gene id symbol gene type direction distance location
AMCG00008751 krt8,LOC105023875,LOC107551542,LOC108411779,LOC107681390 coding downstream 25978 10764016 ~ 10771654 (-)
AMCG00008750 e3,LOC108429286,LOC106565226,LOC107705699 coding downstream 72456 10719492 ~ 10725176 (-)
AMCG00008747 NA coding downstream 135441 10655011 ~ 10662191 (-)
AMCG00008743 LOC103045919,LOC106565233,LOC102299085,LOC100696631,LOC102216220 coding downstream 307866 10472530 ~ 10489766 (-)
AMCG00008739 NA coding downstream 539781 10221420 ~ 10257851 (-)
AMCG00008756 NA coding upstream 159430 10958584 ~ 10972379 (-)
AMCG00008765 NA coding upstream 205002 11004156 ~ 11011571 (-)
AMCG00008763 pcbp2,LOC100691124,LOC103464415,LOC106956729 coding upstream 222394 11021548 ~ 11035727 (-)
AMCG00008761 NA coding upstream 239148 11038302 ~ 11044119 (-)
AMCG00008764 NA coding upstream 245809 11044963 ~ 11051426 (-)
G51243 NA non-coding downstream 123777 10668711 ~ 10673855 (-)
G51120 NA non-coding downstream 866530 9927245 ~ 9931102 (-)
G51103 LOC106928590,LOC103386378,LOC107385311,LOC106514726 non-coding downstream 886832 9909611 ~ 9910800 (-)
G51081 NA non-coding downstream 1058376 9738646 ~ 9739256 (-)
G51057 NA non-coding downstream 1219249 9577268 ~ 9578383 (-)
G51251 krt18,LOC107727028,LOC107551541,LOC100692632,LOC102212553 non-coding upstream 1954 10801108 ~ 10803709 (-)
G51261 eif4b non-coding upstream 39952 10839106 ~ 10839672 (-)
G51344 NA non-coding upstream 258523 11057677 ~ 11140273 (-)
G51354 LOC100846954 non-coding upstream 364192 11163346 ~ 11164374 (-)
G51403 NA non-coding upstream 427333 11226487 ~ 11258218 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 79431 10670949 ~ 10718201 (-)
G51241 NA other downstream 85147 10675756 ~ 10712485 (-)
AMCG00008744 NA other downstream 194259 10560866 ~ 10603373 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other downstream 427316 10338325 ~ 10370316 (-)
G51008 NA other downstream 1404405 9390843 ~ 9393227 (-)
AMCG00008777 dctn2,LOC102785932 other upstream 436488 11235642 ~ 11326359 (-)
AMCG00008815 NA other upstream 1802137 12601291 ~ 12605260 (-)
G51797 NA other upstream 2091657 12890811 ~ 12891597 (-)
G51799 NA other upstream 2096181 12895335 ~ 12897134 (-)
G51867 NA other upstream 2201672 13000826 ~ 13001888 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000305_00342924_00346089 NA coding CI01000305 null 342816 ~ 346229 (+)
mexican tetra (Astyanax mexicanus) G137272 krt18 unknown NC_035911.1 CM008314.1 34702618 ~ 34704611 (+)