Gene
RNA
| Item | Value |
|---|---|
| gene id | G51252 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 10803906 ~ 10804107 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64131 | True | 202 | lncRNA | 0.33 | 1 | 10803906 | 10804107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008753 | NA | coding | upstream | 234 | 10797771 ~ 10803672 (+) |
| AMCG00008746 | tmem106c,LOC107704621 | coding | upstream | 178737 | 10618726 ~ 10625169 (+) |
| AMCG00008745 | NA | coding | upstream | 185741 | 10611383 ~ 10618165 (+) |
| AMCG00008742 | LOC107709223 | coding | upstream | 491809 | 10311582 ~ 10312097 (+) |
| AMCG00008737 | slc48a1,LOC106567162,LOC106572510,LOC105022284 | coding | upstream | 518748 | 10276950 ~ 10285158 (+) |
| AMCG00008754 | NA | coding | downstream | 90935 | 10895042 ~ 10906610 (+) |
| AMCG00008755 | NA | coding | downstream | 107020 | 10911127 ~ 10929774 (+) |
| AMCG00008758 | NA | coding | downstream | 134132 | 10938239 ~ 10949947 (+) |
| AMCG00008757 | NA | coding | downstream | 145907 | 10950014 ~ 10950787 (+) |
| AMCG00008759 | NA | coding | downstream | 193463 | 10997570 ~ 11017498 (+) |
| G51226 | NA | non-coding | upstream | 91421 | 10675565 ~ 10712485 (+) |
| G51220 | NA | non-coding | upstream | 130122 | 10609746 ~ 10673784 (+) |
| G51212 | NA | non-coding | upstream | 233970 | 10569710 ~ 10569936 (+) |
| G51211 | NA | non-coding | upstream | 236095 | 10566737 ~ 10567811 (+) |
| G51210 | NA | non-coding | upstream | 238966 | 10564374 ~ 10564940 (+) |
| G51265 | NA | non-coding | downstream | 63828 | 10867935 ~ 10910645 (+) |
| G51283 | NA | non-coding | downstream | 146970 | 10951077 ~ 10953420 (+) |
| G51298 | NA | non-coding | downstream | 216109 | 11020216 ~ 11057436 (+) |
| G51446 | NA | non-coding | downstream | 661705 | 11465812 ~ 11466083 (+) |
| G51483 | NA | non-coding | downstream | 908605 | 11712712 ~ 11716482 (+) |
| AMCG00008749 | krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 | other | upstream | 32231 | 10692377 ~ 10771675 (+) |
| AMCG00008725 | NA | other | upstream | 866154 | 9915494 ~ 9937752 (+) |
| AMCG00008727 | NA | other | upstream | 872391 | 9927387 ~ 9931515 (+) |
| AMCG00008707 | tfcp2,LOC107715039,LOC107671887,LOC106572516 | other | upstream | 1424327 | 9355092 ~ 9379579 (+) |
| AMCG00008710 | NA | other | upstream | 1487755 | 9310086 ~ 9316151 (+) |
| AMCG00008752 | LOC107666323 | other | downstream | 24461 | 10828568 ~ 10846436 (+) |
| G51297 | NA | other | downstream | 180783 | 10984890 ~ 11040674 (+) |
| G51445 | NA | other | downstream | 656256 | 11460363 ~ 11465488 (+) |
| AMCG00008784 | NA | other | downstream | 890547 | 11694654 ~ 11704413 (+) |
| AMCG00008810 | NA | other | downstream | 1735491 | 12539598 ~ 12549618 (+) |
