G51265


Basic Information

Item Value
gene id G51265
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10867935 ~ 10910645 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64158
AGATAGAGAGTGAGAGGGATGCAGTGTGGCCTGGCGTGCACCTTAATGGCGCATTTTCTCCAGCTGACATAAACAATTTCTGGCTGTACAGCTGTCATTTCTTTGAAATTCCCCTGACTCTGACACTCCCACACTCCCCATCTCCAAACCCCTATGTTTGGGATTGGTCAACTCAGCCAGTCTATAGGATGCAAGCTGTGCCCTGGAGGAGTGCTGTTATGGGAGGTGCCACTAGAGGGAGCCCCTCCAGACAGATCTTTTGTGAACGTCTCTGGTCCTGCTCTAAATGGACTGTGATGTTAATGGGAGATGCACACACCACACTCTCATTCTCGCACTGCCCCCAATTATCAAGTAACTGATATTCCACCTGTTCTACATGaggtaaaaatacatttgcaaatggtACAAACGGCTCTAGACAATCCTGTATTGAATCCATATACCTTTtcaaaaatatgcatgtttaaaTAGGGTACCCTTGCtctttaattcacttttttctgtCCATCCCCGACTCAGACCCTTGTTGCATCTCTTTTGGTAAACTGTGCCCAGTGTCTGTCACTCTCGATGCTTCcgtttatacattttgaaaaatcagTGTAGATCTACAAACCTGCCATCCTCCTTTCTCTTCCTGGGGGTCGTCTAGGTCAAACCTATAGAGCCTGGCTGGTGAATAGACTGCATCAGAGTGAGGCTCAATGACAAATGATGCTATCAGGCCTCTGATGCAGAAACGTGCCTCTTTCAAGTGCAATGATGTGTTTGCGtacgtgtgtgagagagtgtagTGAGTGACTGGGCTAAGGAATGTCCCTTTTGTTCCCCTCTGccagtgaaaagtgaaatataaatgagaCCAGTGTAACCAAGCACTGGGGACGACCACAAAGAAAACGGTTATTATTAGACATTGAAGACACTGGATATTCATGTCATTTTGGGGTCAAAGGTGCCTCAGACCGGTGGCAGCCTATGTTAGATGGAAAACATGGGTTGAGTACTCCTATAGGAGCTTAGCCAAGGGGATAAAACAGAGTTGGAATTTGGGTTAATTTGGTCAGGGATGTAGGGAAACTCGGATCAATTATGAAACCAATGGCGTTTCTGGAATGGTATGTTGGCAGGACCCAGGACAATCAAGTGCGAAACAGAGACTGAGATCTGAAAAGGGGGGCAACAAGAAGAAATTGCACATGAACACAGATCTGAACTGCTTTAAGTTCAGGGATAATCATAGGATTTAGAATGGGAAGTAAGTTTCCAAGGGAGATTGAGGTTTCAGGGGCAAGATAGGGAAGTAGGTGGAATTTAGGAGGGTTGTCTTCAATGGCATCTTTTACAGAGCTTTTAGAGCTGAATGGGAGAGATAGAGAGCACATTGCCACTCCACCCCATAAACACAGAGTCCACATAAGGTCTCTTCTCTATCATGGCATGCATTGatccatttaaatattaatcGGAGacaccatttttaattttaatttatttttttagttgaGCAAGGAGACCGCCCCAAGGTTTATGGCAgagagatgattaaaggaactCTATTGTATAATCACTGTGTCTGTAGGTCGCTTTAACCAAAGACTTTTACTGTGCACTCTCGCTACACGTTAAAGCTATATTcagttgtattttgtaaaagctttgtgcatttatatttacataacattagttttttgttttgtttttttaaacagttaaaaaaagacACCAAGTCTAAGACAGctttaatatattgtgttttgtgttatgtttttttataacaatCTTTGTATgtagtaatatatttttctcacaTGCAGCTGCCTCggaaaatatataagaaaaggATGGAAACAGtataagagaaaaaaatgaatttatattatatttgctattttttaaaactgcaatgtataccaaaaaatgaagaatataaataaaaatgtatagttaTGTTACTGATATTTTGTCTTtatctgttgctttttttcATGTAAGAAGTCTTACTAGTTTATGCTGGTaatgtttgtaaaatgattACTGATGTTGTcatttgttgcatttatttatttatctacatagatttttattttttttatcctagagggtttttggtttgtttcttttgttttttaaaactgaagCTTTTTAATAGGCTAAGTATTTCAATGCTTTTAGGCCTACTGGCACATTATTTGTTCTAGATTAATCTTCGACCTGAGAAGCGCGAGACGCATGtatctgaaataaatgcattgacaCACTTTCATTACGTCACGACTAAACCCATACAAACAACACTACCCTGCcaacaattttgttttctaaatcgATTATTCAAActatagttttattttggtaGAACTAAGAATCACTGTGAAGTTGTCATTGTTGTGAATGTTTTCAATTAGATGTGTGTTTACAAAAGGATAAAAGTTTCCATCTTTCTATGTCTGAAGAtgtgttgaatgtgttttttaccATGAGAAAATTCTTGGCGAGAAAGAAACGTGTTTCTGCTGCAAAGATCAATCACTCATCTTGGTGACCTGTGGTAGCAGACTCAAGAAGCAGTAGGTAATGGGGTTGAATAATAAAGCACCATgctgta

Function

NR:

description
PREDICTED: proprotein convertase subtilisin/kexin type 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64158 True 2611 lncRNA 0.39 2 10867935 10910645

Neighbor

gene id symbol gene type direction distance location
AMCG00008753 NA coding upstream 64263 10797771 ~ 10803672 (+)
AMCG00008746 tmem106c,LOC107704621 coding upstream 242766 10618726 ~ 10625169 (+)
AMCG00008745 NA coding upstream 249770 10611383 ~ 10618165 (+)
AMCG00008742 LOC107709223 coding upstream 555838 10311582 ~ 10312097 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding upstream 582777 10276950 ~ 10285158 (+)
AMCG00008755 NA coding downstream 482 10911127 ~ 10929774 (+)
AMCG00008758 NA coding downstream 27594 10938239 ~ 10949947 (+)
AMCG00008757 NA coding downstream 39369 10950014 ~ 10950787 (+)
AMCG00008759 NA coding downstream 86925 10997570 ~ 11017498 (+)
AMCG00008760 NA coding downstream 142097 11052742 ~ 11061279 (+)
G51252 NA non-coding upstream 63828 10803906 ~ 10804107 (+)
G51226 NA non-coding upstream 155450 10675565 ~ 10712485 (+)
G51220 NA non-coding upstream 194151 10609746 ~ 10673784 (+)
G51212 NA non-coding upstream 297999 10569710 ~ 10569936 (+)
G51211 NA non-coding upstream 300124 10566737 ~ 10567811 (+)
G51283 NA non-coding downstream 40432 10951077 ~ 10953420 (+)
G51298 NA non-coding downstream 109571 11020216 ~ 11057436 (+)
G51446 NA non-coding downstream 555167 11465812 ~ 11466083 (+)
G51483 NA non-coding downstream 802067 11712712 ~ 11716482 (+)
G51582 NA non-coding downstream 1151429 12062074 ~ 12062289 (+)
AMCG00008752 LOC107666323 other upstream 21499 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 96260 10692377 ~ 10771675 (+)
AMCG00008725 NA other upstream 930183 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 936420 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 1488356 9355092 ~ 9379579 (+)
G51297 NA other downstream 74245 10984890 ~ 11040674 (+)
G51445 NA other downstream 549718 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 784009 11694654 ~ 11704413 (+)
AMCG00008810 NA other downstream 1628953 12539598 ~ 12549618 (+)
G51734 NA other downstream 1804849 12715494 ~ 12716786 (+)

Expression


Co-expression Network