G51446


Basic Information

Item Value
gene id G51446
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11465812 ~ 11466083 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64385
CCGGTAGCTTGGCGTTGCGGTTGGGGGGCGTGGGCCGGCGAATCTGTTTCAGCTTGTCGATCTTGAGGTTCTCCAGCCTCTTGAGGGCCTGGGCAGACATGCCCGCTGTGCCCACGCTGTCGCTGGCCACGCCCTCCTCCAGCACAGTCAAGTCCTCTAGGCTGCCTCCTGCATTAGCGTTCATCTCCACTCCGCTGTCGTTGTTGTTGGCGCTCCCTAGTGGTGACCTCTCACTGCTGCAGGAGGACTGGCCTCCCGGGCTGGGCTGGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64385 True 272 lncRNA 0.64 1 11465812 11466083

Neighbor

gene id symbol gene type direction distance location
AMCG00008778 NA coding upstream 73783 11369713 ~ 11392029 (+)
AMCG00008775 NA coding upstream 129591 11331875 ~ 11336221 (+)
AMCG00008774 LOC106566145,LOC107558166 coding upstream 174512 11279912 ~ 11291300 (+)
AMCG00008771 NA coding upstream 268060 11189422 ~ 11197752 (+)
AMCG00008770 NA coding upstream 276656 11183217 ~ 11189156 (+)
AMCG00008783 r3hdm2 coding downstream 101775 11567858 ~ 11599637 (+)
AMCG00008782 LOC107563942 coding downstream 136332 11602415 ~ 11618855 (+)
AMCG00008787 NA coding downstream 367203 11833286 ~ 11834344 (+)
AMCG00008791 NA coding downstream 516695 11982778 ~ 12002806 (+)
AMCG00008798 tuba4l,LOC105008555,LOC107706828,LOC107669576 coding downstream 647301 12113384 ~ 12126602 (+)
G51298 NA non-coding upstream 408376 11020216 ~ 11057436 (+)
G51283 NA non-coding upstream 512392 10951077 ~ 10953420 (+)
G51265 NA non-coding upstream 555167 10867935 ~ 10910645 (+)
G51252 NA non-coding upstream 661705 10803906 ~ 10804107 (+)
G51226 NA non-coding upstream 753327 10675565 ~ 10712485 (+)
G51483 NA non-coding downstream 246629 11712712 ~ 11716482 (+)
G51582 NA non-coding downstream 595991 12062074 ~ 12062289 (+)
G51584 NA non-coding downstream 609405 12075488 ~ 12077513 (+)
G51586 NA non-coding downstream 612614 12078697 ~ 12080204 (+)
G51614 NA non-coding downstream 724650 12190733 ~ 12249909 (+)
G51445 NA other upstream 324 11460363 ~ 11465488 (+)
G51297 NA other upstream 425138 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 619376 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 694137 10692377 ~ 10771675 (+)
AMCG00008725 NA other upstream 1528060 9915494 ~ 9937752 (+)
AMCG00008784 NA other downstream 228571 11694654 ~ 11704413 (+)
AMCG00008810 NA other downstream 1073515 12539598 ~ 12549618 (+)
G51734 NA other downstream 1249411 12715494 ~ 12716786 (+)
G51756 NA other downstream 1376632 12842715 ~ 12846233 (+)
G51812 NA other downstream 1459155 12925238 ~ 12926794 (+)

Expression


Co-expression Network