G51685


Basic Information

Item Value
gene id G51685
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12503916 ~ 12504176 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64660
CTGTATCTTCCTACGCATTTCAATCAAGACACTCCTTTTTGTTCCGACAGTCCCCAGAGTTGCTCTAGGTACCTGTACCTGCTCAATCCAGCGACGCAGCACCGCTTTGCAGATTGGTGGCCCCCGACACAACATAGTAAGACggctttattttattgcccattttattaaatcaattttccTCTCATTATCCTAACCCAATTAGAAAGTGTCGGTGCCCCACTTTtaacaggacacacacacagatacacaaacacacgc

Function

NR:

description
PREDICTED: proliferation-associated protein 2G4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64660 True 261 lncRNA 0.45 1 12503916 12504176

Neighbor

gene id symbol gene type direction distance location
AMCG00008812 NA coding upstream 34373 12468816 ~ 12469543 (+)
AMCG00008805 hoxc6ba,LOC108433405,LOC103034651 coding upstream 38294 12463038 ~ 12465622 (+)
AMCG00008806 hoxc8,hoxc8ab coding upstream 68853 12434623 ~ 12435063 (+)
AMCG00008807 NA coding upstream 80510 12422714 ~ 12423406 (+)
AMCG00008809 NA coding upstream 88811 12399412 ~ 12415105 (+)
AMCG00008811 hoxc4 coding downstream 80 12504256 ~ 12505029 (+)
AMCG00008819 NA coding downstream 64852 12569028 ~ 12569687 (+)
AMCG00008814 hnrnpa1 coding downstream 150391 12654567 ~ 12659732 (+)
AMCG00008813 NA coding downstream 156603 12660779 ~ 12662451 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding downstream 184021 12688197 ~ 12693501 (+)
G51673 NA non-coding upstream 64393 12438851 ~ 12439523 (+)
G51665 NA non-coding upstream 77694 12425933 ~ 12426222 (+)
G51614 NA non-coding upstream 254007 12190733 ~ 12249909 (+)
G51586 NA non-coding upstream 423712 12078697 ~ 12080204 (+)
G51584 NA non-coding upstream 426403 12075488 ~ 12077513 (+)
G51710 NA non-coding downstream 55295 12559471 ~ 12559699 (+)
G51718 NA non-coding downstream 142347 12646523 ~ 12647964 (+)
G51735 NA non-coding downstream 216906 12721082 ~ 12722980 (+)
G51736 NA non-coding downstream 235021 12739197 ~ 12745766 (+)
G51796 NA non-coding downstream 392173 12896349 ~ 12897107 (+)
AMCG00008784 NA other upstream 799503 11694654 ~ 11704413 (+)
G51445 NA other upstream 1038428 11460363 ~ 11465488 (+)
G51297 NA other upstream 1463242 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 1657480 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 1732241 10692377 ~ 10771675 (+)
AMCG00008810 NA other downstream 35422 12539598 ~ 12549618 (+)
G51734 NA other downstream 211318 12715494 ~ 12716786 (+)
G51756 NA other downstream 338539 12842715 ~ 12846233 (+)
G51812 NA other downstream 421062 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 476628 12980804 ~ 12992725 (+)

Expression


Co-expression Network