G51710


Basic Information

Item Value
gene id G51710
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12559471 ~ 12559699 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64687
ATTATGACCTCTGTACAGGGCACTGGGGAACCCTAGAGTAGGTCCTGAAGGCCACTGGCACTGGTGCAAGATGCTCCTAAAACAGTAGGTAGAGACCTGACTTTAATCATGGTAACAATTAATGATAGAACTGGCCCAGGGCTTAACAATGGCAACGATTCAGCAATGTGGTCAGCAAGAAGGCAAGGTCGAGGTTGACCTAGTAGATTCTGTAATGCTTGTAAATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64687 True 229 lncRNA 0.47 1 12559471 12559699

Neighbor

gene id symbol gene type direction distance location
AMCG00008811 hoxc4 coding upstream 54442 12504256 ~ 12505029 (+)
AMCG00008812 NA coding upstream 89928 12468816 ~ 12469543 (+)
AMCG00008805 hoxc6ba,LOC108433405,LOC103034651 coding upstream 93849 12463038 ~ 12465622 (+)
AMCG00008806 hoxc8,hoxc8ab coding upstream 124408 12434623 ~ 12435063 (+)
AMCG00008807 NA coding upstream 136065 12422714 ~ 12423406 (+)
AMCG00008819 NA coding downstream 9329 12569028 ~ 12569687 (+)
AMCG00008814 hnrnpa1 coding downstream 94868 12654567 ~ 12659732 (+)
AMCG00008813 NA coding downstream 101080 12660779 ~ 12662451 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding downstream 128498 12688197 ~ 12693501 (+)
AMCG00008825 NA coding downstream 243570 12803269 ~ 12810428 (+)
G51685 NA non-coding upstream 55295 12503916 ~ 12504176 (+)
G51673 NA non-coding upstream 119948 12438851 ~ 12439523 (+)
G51665 NA non-coding upstream 133249 12425933 ~ 12426222 (+)
G51614 NA non-coding upstream 309562 12190733 ~ 12249909 (+)
G51586 NA non-coding upstream 479267 12078697 ~ 12080204 (+)
G51718 NA non-coding downstream 86824 12646523 ~ 12647964 (+)
G51735 NA non-coding downstream 161383 12721082 ~ 12722980 (+)
G51736 NA non-coding downstream 179498 12739197 ~ 12745766 (+)
G51796 NA non-coding downstream 336650 12896349 ~ 12897107 (+)
G51814 LOC106567079 non-coding downstream 367919 12927618 ~ 12927845 (+)
AMCG00008810 NA other upstream 9853 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 855058 11694654 ~ 11704413 (+)
G51445 NA other upstream 1093983 11460363 ~ 11465488 (+)
G51297 NA other upstream 1518797 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 1713035 10828568 ~ 10846436 (+)
G51734 NA other downstream 155795 12715494 ~ 12716786 (+)
G51756 NA other downstream 283016 12842715 ~ 12846233 (+)
G51812 NA other downstream 365539 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 421105 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 662621 13222320 ~ 13224946 (+)

Expression


Co-expression Network