Gene
RNA
| Item | Value |
|---|---|
| gene id | G51718 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 12646523 ~ 12647964 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64697 | True | 335 | lncRNA | 0.61 | 2 | 12646523 | 12647964 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008819 | NA | coding | upstream | 76836 | 12569028 ~ 12569687 (+) |
| AMCG00008811 | hoxc4 | coding | upstream | 141494 | 12504256 ~ 12505029 (+) |
| AMCG00008812 | NA | coding | upstream | 176980 | 12468816 ~ 12469543 (+) |
| AMCG00008805 | hoxc6ba,LOC108433405,LOC103034651 | coding | upstream | 180901 | 12463038 ~ 12465622 (+) |
| AMCG00008806 | hoxc8,hoxc8ab | coding | upstream | 211460 | 12434623 ~ 12435063 (+) |
| AMCG00008814 | hnrnpa1 | coding | downstream | 6603 | 12654567 ~ 12659732 (+) |
| AMCG00008813 | NA | coding | downstream | 12815 | 12660779 ~ 12662451 (+) |
| AMCG00008820 | copz1,LOC105907582,LOC107664248 | coding | downstream | 40233 | 12688197 ~ 12693501 (+) |
| AMCG00008825 | NA | coding | downstream | 155305 | 12803269 ~ 12810428 (+) |
| AMCG00008824 | NA | coding | downstream | 172834 | 12820798 ~ 12840200 (+) |
| G51710 | NA | non-coding | upstream | 86824 | 12559471 ~ 12559699 (+) |
| G51685 | NA | non-coding | upstream | 142347 | 12503916 ~ 12504176 (+) |
| G51673 | NA | non-coding | upstream | 207000 | 12438851 ~ 12439523 (+) |
| G51665 | NA | non-coding | upstream | 220301 | 12425933 ~ 12426222 (+) |
| G51614 | NA | non-coding | upstream | 396614 | 12190733 ~ 12249909 (+) |
| G51735 | NA | non-coding | downstream | 73118 | 12721082 ~ 12722980 (+) |
| G51736 | NA | non-coding | downstream | 91233 | 12739197 ~ 12745766 (+) |
| G51796 | NA | non-coding | downstream | 248385 | 12896349 ~ 12897107 (+) |
| G51814 | LOC106567079 | non-coding | downstream | 279654 | 12927618 ~ 12927845 (+) |
| G51828 | NA | non-coding | downstream | 330900 | 12978864 ~ 12980775 (+) |
| AMCG00008810 | NA | other | upstream | 96905 | 12539598 ~ 12549618 (+) |
| AMCG00008784 | NA | other | upstream | 942110 | 11694654 ~ 11704413 (+) |
| G51445 | NA | other | upstream | 1181035 | 11460363 ~ 11465488 (+) |
| G51297 | NA | other | upstream | 1605849 | 10984890 ~ 11040674 (+) |
| AMCG00008752 | LOC107666323 | other | upstream | 1800087 | 10828568 ~ 10846436 (+) |
| G51734 | NA | other | downstream | 67530 | 12715494 ~ 12716786 (+) |
| G51756 | NA | other | downstream | 194751 | 12842715 ~ 12846233 (+) |
| G51812 | NA | other | downstream | 277274 | 12925238 ~ 12926794 (+) |
| AMCG00008837 | march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 | other | downstream | 332840 | 12980804 ~ 12992725 (+) |
| G51928 | LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 | other | downstream | 574356 | 13222320 ~ 13224946 (+) |
