G51735


Basic Information

Item Value
gene id G51735
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12721082 ~ 12722980 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64731
ATCGAACGGGCCTACACGGCTCTTACCTGTCGCAGTGCCCCCGCCCCCTCAGTCCTGGACAAACTGTTCTGTGATCGGCTCTGTCTGCCACActacaaaaaaaaACCTGCTCGTTTTCCCCTCGTGTCCGGCTGTTTTCGCTCCCTCTCTCGCCGAGTTGCAGTCCTCCCTCAGTTTACAAACACAGGAAACGCCACCGGAAGTGCTCCCCGGGGAGAGTGGCACCACGTGACTCCGAGGGGTTAGCagagaagaaggggaaaaaaaaaggttag

Function

GO: NA

KEGG:

id description
ko04142 Lysosome
ko04614 Renin-angiotensin system

RNA

RNA id representative length rna type GC content exon number start site end site
TU64731 True 275 lncRNA 0.56 2 12721082 12722980

Neighbor

gene id symbol gene type direction distance location
AMCG00008820 copz1,LOC105907582,LOC107664248 coding upstream 27581 12688197 ~ 12693501 (+)
AMCG00008813 NA coding upstream 58631 12660779 ~ 12662451 (+)
AMCG00008814 hnrnpa1 coding upstream 61350 12654567 ~ 12659732 (+)
AMCG00008819 NA coding upstream 151395 12569028 ~ 12569687 (+)
AMCG00008811 hoxc4 coding upstream 216053 12504256 ~ 12505029 (+)
AMCG00008825 NA coding downstream 80289 12803269 ~ 12810428 (+)
AMCG00008824 NA coding downstream 97818 12820798 ~ 12840200 (+)
AMCG00008828 NA coding downstream 168022 12891002 ~ 12895612 (+)
AMCG00008830 pip4k2c,LOC103385206 coding downstream 176915 12899895 ~ 12907881 (+)
AMCG00008829 NA coding downstream 186705 12909685 ~ 12912736 (+)
G51718 NA non-coding upstream 73118 12646523 ~ 12647964 (+)
G51710 NA non-coding upstream 161383 12559471 ~ 12559699 (+)
G51685 NA non-coding upstream 216906 12503916 ~ 12504176 (+)
G51673 NA non-coding upstream 281559 12438851 ~ 12439523 (+)
G51665 NA non-coding upstream 294860 12425933 ~ 12426222 (+)
G51736 NA non-coding downstream 16217 12739197 ~ 12745766 (+)
G51796 NA non-coding downstream 173369 12896349 ~ 12897107 (+)
G51814 LOC106567079 non-coding downstream 204638 12927618 ~ 12927845 (+)
G51828 NA non-coding downstream 255884 12978864 ~ 12980775 (+)
G51904 NA non-coding downstream 417583 13140563 ~ 13187139 (+)
G51734 NA other upstream 4296 12715494 ~ 12716786 (+)
AMCG00008810 NA other upstream 171464 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 1016669 11694654 ~ 11704413 (+)
G51445 NA other upstream 1255594 11460363 ~ 11465488 (+)
G51297 NA other upstream 1680408 10984890 ~ 11040674 (+)
G51756 NA other downstream 119735 12842715 ~ 12846233 (+)
G51812 NA other downstream 202258 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 257824 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 499340 13222320 ~ 13224946 (+)
G51939 NA other downstream 530834 13253814 ~ 13257640 (+)

Expression


Co-expression Network