G51756


Basic Information

Item Value
gene id G51756
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12842715 ~ 12846233 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64761
AGCCATCTTTATTAATGTGTATAAACATCTCAATATCTGTACATACTTCAGCGTGAGAGCACACCGTGCGCAGGCAAGATACAAAACCAGAGGTGCTGAGCGGAGGCTGTGATGAAGGAGCGAGCAGCGAACAGGCCAGTAAGACTCGAGAGGGGTAGAGGCACAGTCACCACACTCTCCTGCACACCCCCAGCTGGGCAGCATGTTTGGCACTTTGGGCTTCTCTTGCTGCCAGGCTGGAGCCCAGTCGCTCAGGCGACGCAGGGTTCTGAAAAGGTGAGAAAAACCGGCCCGGCTGGATGAATGTCAGGCGCTACGGTATCAGTTCCAGGTGGTGGCACCTTGAATGAACAGATTCCGTTAAGGCATCGCCTGGGAATGACTGAAACGGATCAGGTAACCAGATACTTCAGTgcgggggagagagacagagctcCAGCAGCCCTCCCCATCTGTGAGCAGAGTGGTAGAGTCCTAAAACTCCCCCCACTTCACCTGGTGTTAAAAAGACGTTTGTTCTGTCTGGCCAGGAAGCACCTCAACACATTGGGGGAGAAGCAGGAACAGGTGGCCCTGTCAggctctctctgccccccccccgccccagcTGGGTCTTGTGAGATAATCATTGGATGTGGATGTGCTGTCACTCATGGTAACCATAACAACAAAAGAACACAGGAAACACCCCCCATCCAACATTTTGGGTAGCATATCTGCAAAGTGCGTGTGGCGACAGTATATcgatttaatcatttttatacCTTTTTACATTGCAGCAATGGACAGTGAAAAGCAAGATTATCATGGAGAACGGCACCCACAACCAGAGGAGAAAATGAAACTAATAATCTCAGTAAAGGTGCCTTTTGTTACTAACAAGTGCAATATGATAACTGGACCACGAGGAGGGGTgttacaaagaaaagaaaatatcaaaaaccacaacaaaaaaaaagtgaatacagAAGCACCTAACCCTTGTTAAGTTGTCTGTTCTCCAGATGTCTGGTGTGACCCTGTACCTGAGTTCTCCGAGCTGATAGCTGccactcctctcctctcctagCGTTAAAGACCTTAGGAAGATTAATACCAGTGCCCTGTAACGGAGACAGTGTTCCTGCCGAAGGGGGGAGGTGAGCCTAGGGCTGGAGCTGCCAAACGCACTGGCCCAGTCTGGGTCATCTTCATCTGCCAGTGCGTTTGGCAGATTTTTCCAGATAGGATATTACTACATAGCTGCACCTCCCTACCAAAGAAAgtgacttaaaaatatatatctcttGCAGCTTCAGAAATGTCTGCACGCACACAAATGCACTGAATCACATTTTCCTCCTCATCCCTCCCTCTTTCATTctctacccccccacacacctctTTGCaattaacagtatttttaaagaCTTTGCAGCATAAGAGTGATAGTAAATACATGCTATAGATCACATGCTCAGCACAATATTAGTGTGattcaaaaatatatgtatatatttatatttgtatttataaagttATTTACTGATGATTATTGTACAGGGAGCAGGCTCCGATTGCAgcacaaatcaaaatgaaacGAAAACCAAATCCAGCTAAATTAATCTTATTCACAGCAAAAAGAAATGGGGACACCATGTGGTCAAAGCAAGTACTGCCTCATCATGGTGTCCTATAACATGAGTCAATCTGAAATATTAGGAGATCGGTCAATAGTATAAGTAAGGGATTTCCAAACTGGTCCCGTAGGATCCACTGTTCTGATGGCTTGTGTTCCAAcagagctcttaattacataattgagccttatagagtcaattaagcaattaagatatcagttggaacaaaaaactgCATTACAGGGAGTCCTACAGGATTGGTTTAGAATCCCTAgtgcaggggttttcaaactggtcctggagtaccccctgccctgctgtttttttatccaacctaggtcttaattacttaattgaatggtatagtgctttgttaggtcaattaaggattcaattaagcaaaaaCCAgaagggcagggggtactccaggaccggtttgaaaacccctgcccTAGTGCAAGTAAAGGGAAggttcaatgtatttttttctgttgtctttatttttaaacacatttaataacgtGATATGCCGTTGTTCTGGACAAAAGATTAATTGTATGTTATGAATAGAAGTAACTATGCAGTAGTGTCACTATGATTTAATGggttataaatgtttaataactATTGTTTTTAGAAAACTTTCATATTTACCTATAGGCAGAGGATCTGAGACATGATGCtgtaaaacactgtttaaaaaaaggcaCGTTTACAGCGAGTTCTGAGCTGTAAAGCGTGGGAACCTCCCCTTTAATTCCAGGAGCTGGATCACCTCATTTTTCAGATGGACTCATTTTACACGACACTGGGTCTGGAGGCAGAAGCTGAAGATGATTTTAACGGTGTCACTCAATCAGCTGTTGCGGTACTGATGCTCAGTGTCCAGACCCAGGGCCTGGCGTGAAAAATATCCCTTTCTGAACACCTGAGGAGAAGGACCAAAGTGCTGTgattaattaagtaatgaatTCGCTGAATGGGGGTATTTAAGAACACGGGGATAATGGGAAAAAAGAGGCTAGTGCTGAAATCACGTGCCTCTACTTGTGAAGAGAACCGTTGCCGCAGTGCCCGAGCGTTGCCATATTGTTATGGGCAGGTAGAGACCCCCCTTGAGAGACGGAATTACTACAAAGTGACAGAGTCTCACGTGTTCGGACTGGCAGCTcccaacagaaatatatgtacacattgtattatgattattaaaattattatttaaaatgcttggAAAATTATTTGGTacttatttaaagttaaatacatatatatgtcagGGTGGCAGGCACAAAATTATTCCTGCCATTCATGTCTGCGTGTTAAAGGCATTTCAAagatcaatatatatttttttaaatgatacccATATATCTTTATGTTACACATAGATTtagaaatatacatgtataggtctccatataaatgtattcaatacgCACTTCGATTAAGTTTACTTTCTGAAATTGCTCAAGTACCTCGCCATCATTTCAGAATTGACTTCAAATGTGACTTTGAATATCTCCAAATGTGTAATCAACGGTTCTAGGGTGGAGATGAAGAGCTCTGCCAGACAGCGGGACCCCCAGAGCCAGGGCCGAGATGCCCTGCCCCCCAGGTCAGACCAGAGTATGAATATCACAGCCTGAGATGGCCCAGACCGTATGGCTATCTGCAGCCCTGCGCGTACATGCATCCCACTGGCACACATCCATTcaataacaatactactactaatcataataataataatttaaaaaactacCCATCTTCCTAGTGACTGAGCCTCttgttgcaaaaatacagtttagcAGAGTACAGCACAAGCTCGCCCACACGACCCGGCTGTCTGGCACAAAACCCACTCACAAAGCTCAGAATAAAACCTACTTccgattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64761 True 3519 TUCP 0.43 1 12842715 12846233

Neighbor

gene id symbol gene type direction distance location
AMCG00008824 NA coding upstream 2515 12820798 ~ 12840200 (+)
AMCG00008825 NA coding upstream 32287 12803269 ~ 12810428 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding upstream 149214 12688197 ~ 12693501 (+)
AMCG00008813 NA coding upstream 180264 12660779 ~ 12662451 (+)
AMCG00008814 hnrnpa1 coding upstream 182983 12654567 ~ 12659732 (+)
AMCG00008828 NA coding downstream 44769 12891002 ~ 12895612 (+)
AMCG00008830 pip4k2c,LOC103385206 coding downstream 53662 12899895 ~ 12907881 (+)
AMCG00008829 NA coding downstream 63452 12909685 ~ 12912736 (+)
AMCG00008831 NA coding downstream 112524 12958757 ~ 12962983 (+)
AMCG00008836 NA coding downstream 150865 12997098 ~ 13002084 (+)
G51736 NA non-coding upstream 96949 12739197 ~ 12745766 (+)
G51735 NA non-coding upstream 119735 12721082 ~ 12722980 (+)
G51718 NA non-coding upstream 194751 12646523 ~ 12647964 (+)
G51710 NA non-coding upstream 283016 12559471 ~ 12559699 (+)
G51685 NA non-coding upstream 338539 12503916 ~ 12504176 (+)
G51796 NA non-coding downstream 50116 12896349 ~ 12897107 (+)
G51814 LOC106567079 non-coding downstream 81385 12927618 ~ 12927845 (+)
G51828 NA non-coding downstream 132631 12978864 ~ 12980775 (+)
G51904 NA non-coding downstream 294330 13140563 ~ 13187139 (+)
G51968 NA non-coding downstream 463383 13309616 ~ 13310773 (+)
G51734 NA other upstream 125929 12715494 ~ 12716786 (+)
AMCG00008810 NA other upstream 293097 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 1138302 11694654 ~ 11704413 (+)
G51445 NA other upstream 1377227 11460363 ~ 11465488 (+)
G51297 NA other upstream 1802041 10984890 ~ 11040674 (+)
G51812 NA other downstream 79005 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 134571 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 376087 13222320 ~ 13224946 (+)
G51939 NA other downstream 407581 13253814 ~ 13257640 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other downstream 460262 13306495 ~ 13309430 (+)

Expression


Co-expression Network