G51796


Basic Information

Item Value
gene id G51796
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12896349 ~ 12897107 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64810
GGTTTGGTCCCGATAAAGCATTGATCACACGTGCAGTTCGAACCCTCCGCCTCTCCCTCCATTTCCTTGGAGACACTGACAACATTACATATGATTATaccaaatgtttatatttaatttattctggagtgatatgttattttctgtctcacacacttacacatacGCATATATGCAATGTATACAATCTATAGAAATCTAGAAACTCAACAGCTGTCTTCCATTTTTTCCCATATTTCCAACACCATCCTATAAACAACCAaagaattaattttaaaaagcaacatgTCATCACATAATTtccctgtttaactgttttctgGAGACTGCTGTACTTtttgagaataaataaacaaatcaattgttaaatgtatttttcatacacGTAAAAGCTTTAATATTAAAGTCtgttcatattatttaattaacggctatgtattgtttttaatatgtataatggATTTTTCcacttattattgttttattcttttgagACTGTCTATTTAAGAACTTTACAGTGTGTTTGTACATCAGGAGAGATGACACTGTTTAGTGGAAAACACTTTGAGCAGTTTGTCGTTTCGGGCCTGTTGTGCTGTTTGTACTGCTGTACGTCCATCTCACCACTTCGGATGATTGTGTTACTATTTATACTGTACGAGTGTCCTTTTGTTATTGAAATTACAAGTAATGAACATGTTaagttttgcttttcaaatgccaCGTGATGCCGtgcagcattttaataaattaagttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64810 True 759 lncRNA 0.33 1 12896349 12897107

Neighbor

gene id symbol gene type direction distance location
AMCG00008828 NA coding upstream 737 12891002 ~ 12895612 (+)
AMCG00008824 NA coding upstream 56149 12820798 ~ 12840200 (+)
AMCG00008825 NA coding upstream 85921 12803269 ~ 12810428 (+)
AMCG00008820 copz1,LOC105907582,LOC107664248 coding upstream 202848 12688197 ~ 12693501 (+)
AMCG00008813 NA coding upstream 233898 12660779 ~ 12662451 (+)
AMCG00008830 pip4k2c,LOC103385206 coding downstream 2788 12899895 ~ 12907881 (+)
AMCG00008829 NA coding downstream 12578 12909685 ~ 12912736 (+)
AMCG00008831 NA coding downstream 61650 12958757 ~ 12962983 (+)
AMCG00008836 NA coding downstream 99991 12997098 ~ 13002084 (+)
AMCG00008838 NA coding downstream 108495 13005602 ~ 13014133 (+)
G51736 NA non-coding upstream 150583 12739197 ~ 12745766 (+)
G51735 NA non-coding upstream 173369 12721082 ~ 12722980 (+)
G51718 NA non-coding upstream 248385 12646523 ~ 12647964 (+)
G51710 NA non-coding upstream 336650 12559471 ~ 12559699 (+)
G51685 NA non-coding upstream 392173 12503916 ~ 12504176 (+)
G51814 LOC106567079 non-coding downstream 30511 12927618 ~ 12927845 (+)
G51828 NA non-coding downstream 81757 12978864 ~ 12980775 (+)
G51904 NA non-coding downstream 243456 13140563 ~ 13187139 (+)
G51968 NA non-coding downstream 412509 13309616 ~ 13310773 (+)
G51969 NA non-coding downstream 414222 13311329 ~ 13312458 (+)
G51756 NA other upstream 50116 12842715 ~ 12846233 (+)
G51734 NA other upstream 179563 12715494 ~ 12716786 (+)
AMCG00008810 NA other upstream 346731 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 1191936 11694654 ~ 11704413 (+)
G51445 NA other upstream 1430861 11460363 ~ 11465488 (+)
G51812 NA other downstream 28131 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 83697 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 325213 13222320 ~ 13224946 (+)
G51939 NA other downstream 356707 13253814 ~ 13257640 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other downstream 409388 13306495 ~ 13309430 (+)

Expression


Co-expression Network