G51799


Basic Information

Item Value
gene id G51799
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12895335 ~ 12897134 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64813
AGATGATTGAACGCATTCAAGAACGtgtaaacttaatttattaaaatgctgcaCGGCATCACGtggcatttgaaaagcaaaacttAACATGTTCATTACTTGTAATTTCAATAACAAAAGGACACTCGTACAGTATAAATAGTAACACAATCATCCGAAGTGGTGAGATGGACGTACAGCAGTACAAACAGCACAACAGGCCCGAAACGACAAACTGCTCAAAGTGTTTTCCACTAAACAGTGTCATCTCTCCTGATGTACAAACACACTGTAAAGTTCTTAAATAGACAGTctcaaaagaataaaacaataataagtgGAAAAATccattatacatattaaaaacaatacatagccgttaattaaataatatgaacaGACTTTAATATTAAAGCTTTTACgtgtatgaaaaatacatttaacaattgatttgtttatttattctcaaaAAGTACAGCAGTCTCcagaaaacagttaaacagggaAATTATGTGATGAcatgttgctttttaaaattaattcttTGGTTGTTTATAGGATGGTGTTGGAAATATGGGAAAAAATGGAAGACAGCTGTTGAGTTTCTAGATTTCTATAGATTGTATACATTGCATATATGCgtatgtgtaagtgtgtgagacagaaaataacatatcactccagaataaattaaatataaacatttggtATAATCATATGTAATGTTGTCAGTGTCTCCAAGGAAATGGAGGGAGAGGCGGAGGGTTCGAACTGCACGTGTGATCAATGCTTTATCGGGACCAAACCCAAACTCTGCCCTGCCAACCAATCGCCGAGCACAAAACCTGTAccctattgtgtttttattaataaggAGTTGAATGTGgtcttggggtgggggggtgggttttGATTCACGGCAAAATTTTGACTTCAGCAATTTTCTACTCAActgttagttttttcttcagtcTTTCATTACAATCATTCGGCTTATCCGCTTGAACTCTGTGTGGCTCCCCAGGTCATTTTGGCAGTGGGTCTTTTCAACTATACTTGTGTGGTGATTACAGATAGTGTTTGGTACACAATGAACACCGCCACATGAACACATGAACACAATGGAAGATGGAAAAGACCACTACTAATTCATTTAGGCAGGTAGTGGCCTtccctgaccccccccccctccccgagAACAActccctaaaataaataaataaataaataaactcctCTTGGTAAAAACATGCTCATCGTGAGAACAGAAATTTCTGCAGCGAGACTGGTATAAGATTACCGCTAGAGGGCAGTGTGGCACTACAGTCTTATAGTGAACTCTCAACGACGTTCGCGCTGCTTTACGGTGTCAACTAGGGGAACTATGGTCACCCCCGGGAAATGTGTGCCTTGCATTGCAAACATAATGGAAGAGTATAAAGTAAGCATGGTTGAGGGATATGCTTGTGTCCAGGGtgctggtgttgtgtgtgtgttttgtgttgagaGCAGATGAtcttttgtggggggggggggggggggttcccaGTCTGTGGCCTGCATCTCTCTGGGATGGGTTGGGGGGTGGGATGGGGACGTGCAGTGTCCAGCACACACTGtggtcttcctcctcctcctcctcctctctccttctccatcCTCCCTTTCTTTCCACCTCtcgccttctctctctcctccacgGGGTGCCAAGCTCCCTCACTCCCTTTCGCAACGCAGGGTGGCCGGGTCCCGGTCAGGGGAGGGCAGCAGCTGGCCGAGCTCGTCCACACACCAGCACTCACCCCTCTGGGTGCCCTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64813 True 1800 TUCP 0.43 1 12895335 12897134

Neighbor

gene id symbol gene type direction distance location
AMCG00008826 spryd3 coding downstream 10667 12863623 ~ 12884668 (-)
AMCG00008827 NA coding downstream 39110 12847007 ~ 12856225 (-)
AMCG00008821 NA coding downstream 149373 12739173 ~ 12745962 (-)
AMCG00008823 NA coding downstream 159856 12725524 ~ 12735479 (-)
AMCG00008822 NA coding downstream 174146 12717117 ~ 12721189 (-)
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding upstream 16402 12913536 ~ 12917796 (-)
AMCG00008833 NA coding upstream 29459 12926593 ~ 12942236 (-)
AMCG00008834 cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 coding upstream 69214 12966348 ~ 12969537 (-)
AMCG00008839 NA coding upstream 133436 13030570 ~ 13046587 (-)
AMCG00008846 NA coding upstream 258363 13155497 ~ 13158303 (-)
G51724 NA non-coding downstream 235218 12657226 ~ 12660117 (-)
G51707 NA non-coding downstream 345718 12547400 ~ 12549617 (-)
G51706 NA non-coding downstream 354991 12539607 ~ 12540344 (-)
G51700 NA non-coding downstream 391656 12503462 ~ 12503679 (-)
G51693 NA non-coding downstream 419136 12454919 ~ 12476199 (-)
G51809 NA non-coding upstream 10187 12907321 ~ 12908333 (-)
G51811 NA non-coding upstream 23411 12920545 ~ 12920791 (-)
G51851 NA non-coding upstream 26070 12923204 ~ 12924656 (-)
G51875 NA non-coding upstream 124890 13022024 ~ 13023104 (-)
G51946 NA non-coding upstream 272296 13169430 ~ 13213278 (-)
G51797 NA other downstream 3738 12890811 ~ 12891597 (-)
AMCG00008815 NA other downstream 290075 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1568976 11235642 ~ 11326359 (-)
G51250 NA other downstream 2096181 10797632 ~ 10799154 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 2177134 10670949 ~ 10718201 (-)
G51867 NA other upstream 103692 13000826 ~ 13001888 (-)
AMCG00008845 NA other upstream 193403 13090537 ~ 13097934 (-)
AMCG00008844 NA other upstream 238598 13135732 ~ 13184356 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 360564 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 410288 13307422 ~ 13309425 (-)

Expression


Co-expression Network