Gene
RNA
| Item | Value |
|---|---|
| gene id | G51811 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 12920545 ~ 12920791 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64825 | True | 247 | lncRNA | 0.52 | 1 | 12920545 | 12920791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008832 | zbtb39,LOC102796472,LOC106567078 | coding | downstream | 2749 | 12913536 ~ 12917796 (-) |
| AMCG00008826 | spryd3 | coding | downstream | 35877 | 12863623 ~ 12884668 (-) |
| AMCG00008827 | NA | coding | downstream | 64320 | 12847007 ~ 12856225 (-) |
| AMCG00008821 | NA | coding | downstream | 174583 | 12739173 ~ 12745962 (-) |
| AMCG00008823 | NA | coding | downstream | 185066 | 12725524 ~ 12735479 (-) |
| AMCG00008833 | NA | coding | upstream | 5802 | 12926593 ~ 12942236 (-) |
| AMCG00008834 | cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 | coding | upstream | 45557 | 12966348 ~ 12969537 (-) |
| AMCG00008839 | NA | coding | upstream | 109779 | 13030570 ~ 13046587 (-) |
| AMCG00008846 | NA | coding | upstream | 234706 | 13155497 ~ 13158303 (-) |
| AMCG00008843 | NA | coding | upstream | 253402 | 13174193 ~ 13180841 (-) |
| G51809 | NA | non-coding | downstream | 12212 | 12907321 ~ 12908333 (-) |
| G51724 | NA | non-coding | downstream | 260428 | 12657226 ~ 12660117 (-) |
| G51707 | NA | non-coding | downstream | 370928 | 12547400 ~ 12549617 (-) |
| G51706 | NA | non-coding | downstream | 380201 | 12539607 ~ 12540344 (-) |
| G51700 | NA | non-coding | downstream | 416866 | 12503462 ~ 12503679 (-) |
| G51851 | NA | non-coding | upstream | 2413 | 12923204 ~ 12924656 (-) |
| G51875 | NA | non-coding | upstream | 101233 | 13022024 ~ 13023104 (-) |
| G51946 | NA | non-coding | upstream | 248639 | 13169430 ~ 13213278 (-) |
| G51950 | NA | non-coding | upstream | 288760 | 13209551 ~ 13211199 (-) |
| G51947 | NA | non-coding | upstream | 293481 | 13214272 ~ 13215995 (-) |
| G51799 | NA | other | downstream | 23411 | 12895335 ~ 12897134 (-) |
| G51797 | NA | other | downstream | 28948 | 12890811 ~ 12891597 (-) |
| AMCG00008815 | NA | other | downstream | 315285 | 12601291 ~ 12605260 (-) |
| AMCG00008777 | dctn2,LOC102785932 | other | downstream | 1594186 | 11235642 ~ 11326359 (-) |
| G51250 | NA | other | downstream | 2121391 | 10797632 ~ 10799154 (-) |
| G51867 | NA | other | upstream | 80035 | 13000826 ~ 13001888 (-) |
| AMCG00008845 | NA | other | upstream | 169746 | 13090537 ~ 13097934 (-) |
| AMCG00008844 | NA | other | upstream | 214941 | 13135732 ~ 13184356 (-) |
| AMCG00008853 | ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 | other | upstream | 336907 | 13257698 ~ 13261822 (-) |
| G51974 | rps26 | other | upstream | 386631 | 13307422 ~ 13309425 (-) |
