G51812


Basic Information

Item Value
gene id G51812
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12925238 ~ 12926794 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64826
GCCCAGTGTGTTTGAACCTGTTTCCCGGACCAGACAGACAGGTAGGTAGGCACGTCACGTCTTGACCTTTCACCGTGTCCCTGTCGTTAGGGGTGCCCGGAGCACACCCGCCTATCCGTACTGTTGGAGGGGATGGTGGCGGGGGGCTGGACGGGCACTGGCAGTGCTGGCGTCAGTGCCCGTGTCCTGGTGGCAGCGTGCTCTTACTCCCTGGTAAAATTGCTGGCATCTGCTGTTGCATTTTCGGGAGTTGGATGCTTCCcatgttgctgttgctgctgctccaGAGAAGAGTCGTCCATCCCCCCTACCCCAAGAAACTCCCGTCTCCTTCAGCCCTGTTTTAATCATGtctaatatttaatcatatttaatatttttgactTCATTTGTATAGTTCTGAACCAAGTTAATCAGACTAGCGGTGTAGGAATTGGTCCCTGTCACATTCTCCATTAAGGAGGTGCTTCTAACAGCTGAGCCCCCACCCCGCACTGGCTTCTCCTGCTTGTCCAGAGAAGGCTCCCCTGGGTCAGTCTGCAGGTCTGTGGTTCACTGGGCACTGGACTGCAGCATCGCCATTATAATGTCATTGTCGTATTTGTGAGCCCCCTCCTGGGTCAGCAGTCTCCTCCAGTCTCTCCAGTGTGTGGGGGTGGTGACTGGTGAGCCGgagcctctcctctcctctcttccgtGACCATCAGCGATCGTTTGTCACAGTCCGTGCGGGAAGAGGGGAGGCggcaaatgaaaaaagaaaaattccaCAATCTCCAGGCAGGatataaaagaaataaaagataataaataaacgAAAGACAAAAGCAGGACAGGGAGCTCAGACCCCCTCAGCACTCTTCGTCCTGTGACGCCCTGGGCACAGGTCCACATGTCCCCCAAGACACTGACTGAGCCTGGGTACTGGCATTGAGTGTGCTGACCGCACACCGCCCATAGAGCCCCCTTGTTCCTGTCGAAGCCCATGCAAGCAGCACCCCCTCTCCAGTCCTACCTCCCCCCAGCCCACCCagcacagtgtttatttatactGGGCTACACCTGTCAGAGCACCAGTCacctgtcagtcagtcagtcagtcagtgtatcagtcaatcagtcaatcagtcagtcagtcaatcagtcccAAATGCTGTATCCCAGTAGCCCCTGTATCACGgatatcctctctctctttctctccctccttcctttgctccttctctctctccctctggagACAGGGTGGGTGGTTggtgtccagcagggggcaaaGAGTTCTTGTTGTGTCTGGTCTGGGGAGGGTCGTGTCGGGGTCTGGGCTTCGTTGTGGTGGGCGTGGTCACGGGAGGAGGTTAGGACACCCCCCTGCGGGAGTTGGCGCGGCTCAGGCTGGCTGTGCTGGACTTGCGGGAGAGCCCAGGTGTGGACGCGCCGGGGGGGGCCTCGTTGGGGCAGCCGTGCTGGAGCAAGATGTCGGCGCACTCCTGGCTGCCCGCCCGACGCGCCAGCGTCAGCGCTGTCTGACCCTGGGCATCCCGCACCCTCACGTCACTG

Function

GO: NA

KEGG:

id description
ko04660 T cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU64826 True 1557 TUCP 0.57 1 12925238 12926794

Neighbor

gene id symbol gene type direction distance location
AMCG00008829 NA coding upstream 12502 12909685 ~ 12912736 (+)
AMCG00008830 pip4k2c,LOC103385206 coding upstream 17357 12899895 ~ 12907881 (+)
AMCG00008828 NA coding upstream 29626 12891002 ~ 12895612 (+)
AMCG00008824 NA coding upstream 85038 12820798 ~ 12840200 (+)
AMCG00008825 NA coding upstream 114810 12803269 ~ 12810428 (+)
AMCG00008831 NA coding downstream 31963 12958757 ~ 12962983 (+)
AMCG00008836 NA coding downstream 70304 12997098 ~ 13002084 (+)
AMCG00008838 NA coding downstream 78808 13005602 ~ 13014133 (+)
AMCG00008835 NA coding downstream 136701 13063495 ~ 13065081 (+)
AMCG00008840 NA coding downstream 147286 13074080 ~ 13097915 (+)
G51796 NA non-coding upstream 28131 12896349 ~ 12897107 (+)
G51736 NA non-coding upstream 179472 12739197 ~ 12745766 (+)
G51735 NA non-coding upstream 202258 12721082 ~ 12722980 (+)
G51718 NA non-coding upstream 277274 12646523 ~ 12647964 (+)
G51710 NA non-coding upstream 365539 12559471 ~ 12559699 (+)
G51814 LOC106567079 non-coding downstream 824 12927618 ~ 12927845 (+)
G51828 NA non-coding downstream 52070 12978864 ~ 12980775 (+)
G51904 NA non-coding downstream 213769 13140563 ~ 13187139 (+)
G51968 NA non-coding downstream 382822 13309616 ~ 13310773 (+)
G51969 NA non-coding downstream 384535 13311329 ~ 13312458 (+)
G51756 NA other upstream 79005 12842715 ~ 12846233 (+)
G51734 NA other upstream 208452 12715494 ~ 12716786 (+)
AMCG00008810 NA other upstream 375620 12539598 ~ 12549618 (+)
AMCG00008784 NA other upstream 1220825 11694654 ~ 11704413 (+)
G51445 NA other upstream 1459750 11460363 ~ 11465488 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 54010 12980804 ~ 12992725 (+)
G51928 LOC108272117,LOC107678215,LOC107581315,LOC107713111,LOC107551923 other downstream 295526 13222320 ~ 13224946 (+)
G51939 NA other downstream 327020 13253814 ~ 13257640 (+)
AMCG00008856 rps26,RPS26,LOC106567051 other downstream 379701 13306495 ~ 13309430 (+)
G52349 NA other downstream 1555127 14481921 ~ 14483255 (+)

Expression


Co-expression Network