G51851


Basic Information

Item Value
gene id G51851
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12923204 ~ 12924656 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64876
CCAATTTGAAGAAACTATTTGAAGTCTTATTTAAGCAGAGAAAAATAGAGGGAGAAATAAgagtattgtaaaaaaaaagaaaaaaaagacaaatatatatagagataaaTACTATGATATAATGACAATggtgattataattattattattgcaatgtaTGTACAAGATTGTAACTGTACCTAATGGAGTGTGTGCGAGTTCCCCAGCAGCACTCACAACGCGGTGGGTCATGAACTCGGGATCCAgccgttttatttttctgttttgggtttttgttctgtttttctagtgccaactttttttttaaagacatttgatATTTTCTAATGAAGACAGATGTTGTAGTATTTCTTGTTGTTGCCgccgttgttgttgttgttattgttgttgttgttgccgctgttgttgttgttgtagcagTAGTAGGACTAGCAGCTgttgatgttttctttgtttttttcccccgcTGTTGGTTTTCAAGGGGTGtcctgctgggctgggctgggctgggctgcagtgctgtgctgtcctgcaGGACACAGTGCTGGTCAGATTCTCCCCTCCTGGACCTCCAGAGTCACTGAGCAGCaccacacaaacaacacaacacaacacaacacaccaaTACAGGATAAATACAACACCACAGAgcagcacacaacacagcaataCAGActaaatacagcacaacaccacacagcaatacatatttaatacagtatagCACAACACCACACTGCAATAAAAATTGAATACAGAATAGCAcaacacaaatttaaaacagtacagtacacaatacattataacatAGTGCAGTACAGCAGAGTACAATCTgtacaacacagacacaaacacagtaatACAGACTTAATACAGAATTGCATaggtgagtacagtacagttaagGTCATATAGTTCAGTGCAGCGCCATTCGGTACAGTGCGGTGTAATCAAATATTCATACAGTTCAGGCACCGTACAGTCAAGTGCACTTTGACCCAGTTTGGTAATAGAAAGTGCTGTAGGAGAGATAGTGTAGTGCAATAAAACccagtacagtacaacacaatgCCATACGGCAGAAAACGACTGCTTTTGGTGTTTTGATTTCCAAACTGAAACAGGTGCATCCCATAATATTCCAGGACAGCACAGTGGGAGTGGGACAGAGGGGTCTGGCAGACAGCTGACCAGAAAAGTGTAGGGGTAAGTGCGGCACAGGTCAAAGCTGGTCTGCCTCTGAACAACAGACTGGGTCCGAGACAGCCTGTCAGTCCAGTCAATGTGATCGTGTGATTTTCCTATTCtggttttatgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgtttgattttttttggaTTAGAATTTTTGAATTTTGAACAgaattatttctgttgtttcaatcaatgttttctttttttgcaagagttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64876 True 1453 lncRNA 0.40 1 12923204 12924656

Neighbor

gene id symbol gene type direction distance location
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding downstream 5408 12913536 ~ 12917796 (-)
AMCG00008826 spryd3 coding downstream 38536 12863623 ~ 12884668 (-)
AMCG00008827 NA coding downstream 66979 12847007 ~ 12856225 (-)
AMCG00008821 NA coding downstream 177242 12739173 ~ 12745962 (-)
AMCG00008823 NA coding downstream 187725 12725524 ~ 12735479 (-)
AMCG00008833 NA coding upstream 1937 12926593 ~ 12942236 (-)
AMCG00008834 cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 coding upstream 41692 12966348 ~ 12969537 (-)
AMCG00008839 NA coding upstream 105914 13030570 ~ 13046587 (-)
AMCG00008846 NA coding upstream 230841 13155497 ~ 13158303 (-)
AMCG00008843 NA coding upstream 249537 13174193 ~ 13180841 (-)
G51811 NA non-coding downstream 2413 12920545 ~ 12920791 (-)
G51809 NA non-coding downstream 14871 12907321 ~ 12908333 (-)
G51724 NA non-coding downstream 263087 12657226 ~ 12660117 (-)
G51707 NA non-coding downstream 373587 12547400 ~ 12549617 (-)
G51706 NA non-coding downstream 382860 12539607 ~ 12540344 (-)
G51875 NA non-coding upstream 97368 13022024 ~ 13023104 (-)
G51946 NA non-coding upstream 244774 13169430 ~ 13213278 (-)
G51950 NA non-coding upstream 284895 13209551 ~ 13211199 (-)
G51947 NA non-coding upstream 289616 13214272 ~ 13215995 (-)
G51948 NA non-coding upstream 329197 13253853 ~ 13257619 (-)
G51799 NA other downstream 26070 12895335 ~ 12897134 (-)
G51797 NA other downstream 31607 12890811 ~ 12891597 (-)
AMCG00008815 NA other downstream 317944 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1596845 11235642 ~ 11326359 (-)
G51250 NA other downstream 2124050 10797632 ~ 10799154 (-)
G51867 NA other upstream 76170 13000826 ~ 13001888 (-)
AMCG00008845 NA other upstream 165881 13090537 ~ 13097934 (-)
AMCG00008844 NA other upstream 211076 13135732 ~ 13184356 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 333042 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 382766 13307422 ~ 13309425 (-)

Expression


Co-expression Network