G51867


Basic Information

Item Value
gene id G51867
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13000826 ~ 13001888 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64897
CtgacatttcaaatttaaattctAAATCCAGTCCCATGAGGTACAATAGGATCACTGCAGGCTTGACAAGATTGCTGTACAAGAAAAGTAGCGAAGCCAGGGAACAAAAGAAACCATGTGGAGAATTAAGACTGACAGGAACAAGGACTACAGGatttcttttaatataattatttacaatgaCATAACATGTGTCTATTACACAGATtaataattgcttttgttttttttggcaacaGTAGGGTTTGGATATCCCCTCCAATATTATGAAATAGAAAAGTCCCGTCTCTGTGGATAGAGGGCCTGGCTCACTACAGGGATCACCCAATTTATCCTGGGGGAGAGAAAGGCAGCAACTTCTATTCCTATTGCAGCCAACAGTgtgaaatttaaatttaaaaggtaaaaaaaaacgCATTATACCAAACATGGCTGTGTGTGAGGACAGTACACAGGCAGGGTTTAAACACACAGCTGGGAGAGTTCATGGTTCTAGAGTGACTGCAGCATCCAGGCTGAGGCTTCTAGATTGTGGTGTGGTTCTAGATTCAGAGTTTTTGAGTTTATATCAATGTGTCCAAGTCAGTGTGTTTGTCCGCAGGTCAGTCTTTCCGCAGTTTGTCCTTCACCCTGCGGAAGACAGCCAGGTAGTTCTTGCCCCCATTTCTCTGCACTTTCTTGCCCTCCTCTGTACACGTGCCCAGGCGAGGGATGATGATATCATCAGCCTGCAGGGACCAGCTCCTCGTCAGTGACTCTGGTGAACAGGGGATGCTCAGTGAAGTGTTTGACCATCCAGAGATGCACCTCCTCCACGTCTGTGATCGTATACACCAGGCC

Function

GO:

id name namespace
GO:0044422 obsolete organelle part cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU64897 True 840 TUCP 0.44 2 13000826 13001888

Neighbor

gene id symbol gene type direction distance location
AMCG00008834 cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 coding downstream 31289 12966348 ~ 12969537 (-)
AMCG00008833 NA coding downstream 58590 12926593 ~ 12942236 (-)
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding downstream 83030 12913536 ~ 12917796 (-)
AMCG00008826 spryd3 coding downstream 116158 12863623 ~ 12884668 (-)
AMCG00008827 NA coding downstream 144601 12847007 ~ 12856225 (-)
AMCG00008839 NA coding upstream 28682 13030570 ~ 13046587 (-)
AMCG00008846 NA coding upstream 153609 13155497 ~ 13158303 (-)
AMCG00008843 NA coding upstream 172305 13174193 ~ 13180841 (-)
AMCG00008850 NA coding upstream 183551 13185439 ~ 13203264 (-)
AMCG00008848 zc3h10,LOC108412311 coding upstream 205001 13206889 ~ 13208547 (-)
G51851 NA non-coding downstream 76170 12923204 ~ 12924656 (-)
G51811 NA non-coding downstream 80035 12920545 ~ 12920791 (-)
G51809 NA non-coding downstream 92493 12907321 ~ 12908333 (-)
G51724 NA non-coding downstream 340709 12657226 ~ 12660117 (-)
G51707 NA non-coding downstream 451209 12547400 ~ 12549617 (-)
G51875 NA non-coding upstream 20136 13022024 ~ 13023104 (-)
G51946 NA non-coding upstream 167542 13169430 ~ 13213278 (-)
G51950 NA non-coding upstream 207663 13209551 ~ 13211199 (-)
G51947 NA non-coding upstream 212384 13214272 ~ 13215995 (-)
G51948 NA non-coding upstream 251965 13253853 ~ 13257619 (-)
G51799 NA other downstream 103692 12895335 ~ 12897134 (-)
G51797 NA other downstream 109229 12890811 ~ 12891597 (-)
AMCG00008815 NA other downstream 395566 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1674467 11235642 ~ 11326359 (-)
G51250 NA other downstream 2201672 10797632 ~ 10799154 (-)
AMCG00008845 NA other upstream 88649 13090537 ~ 13097934 (-)
AMCG00008844 NA other upstream 133844 13135732 ~ 13184356 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 255810 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 305534 13307422 ~ 13309425 (-)
AMCG00008860 NA other upstream 314979 13316867 ~ 13325227 (-)

Expression


Co-expression Network