G52099


Basic Information

Item Value
gene id G52099
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13685335 ~ 13686737 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65198
gaGTGATGATAAAgatgaataatgttttatttacagtacaggAAATTACCgtgtttagagagagagagaaaataaggaGACAAGTCAGGATTTTCAAAGGTAAGATACAACAGTCCACCAATCCACCAGGATTTCTATTCTTTGCATGTCAACAGTATTACCAAATTCCATGTTGCAAGGATAGGGGACTTTGGGTCttccatttttaaagaaatacaaataaaataaagaaaacaaaacaccaccaCAATGCCAAAGGATGCAGAGGAGCAGCTTCGCTGCTGTGTTGTGAGgagcagtttctctctctctctctctctctctctctctctctctctcgctgaattgcagttgttttttgtcCCCCAACCCCAATGCAAAAGACCGAACATGAAAACAGGGAAGGGCATGGgggtcctggtcctggagtggcGGCAGTGTCTTCTGTCACCTCAACATTCAATTTCTGAAAGGAACCGTTTGTGTGCTAATCTGAACATATATGTGGTCCTTGTGCCCAGCACTGTGAGCAGAGCAGATTAGAACCGAGAGCCACAGATGTCTGCAGGACTCACTGAGGAACAGCCTTCCCCACCCTTGccttaaaaaacattgaaaaataacaaaaaatgaaaatgaacagccAGGGAATTCAAATGCAAAGGATGAGAATCATATACAGGACTAAGATATTTTCCCCTGGGGTCCTGGGGTGTTAAAAGCATCCCCTCACCCCCCCTTTACTAATGAGAGACACCCAATCACTGTGACACAGATAGACTGGGGTGGGGGTGAAGGCCAGGATACACGCAGTCCTGCAGTGGGTGGGCGGCTACTGGATGATGGTGGCGGCAGTCCAGTAGTCCTGGTTGAAGACGATGTCCTCCCCCTGCTTCATGTTGTTGAGCAGGTACTTAATGCCCGCCTTCACCCCGGTCTTCATCCCCGCACCGAAAGCGTACCCCGCGATGCCCGCCGTGCCCCCCGTCATGGCCATCAGGGCGTCAGTGCCCAGGTCCACAGCAGACATCAGTGCCCTCTCCTTGGCCGTGTCACTGCAGTTGACGGCAGCATAGTAGACGGCCGTTCCCAGGTTGTAGAGGGTGCTGACCGCCGGGATCCACTCCACCACACTGTACACCTTCTCCTCCGTCTGGTCCGTGCACTCCGTCTGCGAGCTGCGTCTGGCGCGCCTCCCTATcccttcttcctcctccccctcctgccCCTGCTCTGGGGAGTCTCCGCAATCCTGTACCCAGCTCTCCGAGTCTGCTGAGGGCACGATCCGGCTGCCTCTCCGGAGCACTGTGGAATACCTCCCGGAGCCCTCGCTGCTGTTAGTGGCAGAGACGCCTGAACATTGCGGCCCCAGACTCTCGCACTCCCTCATGGCCTCTTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU65198 True 1403 TUCP 0.52 1 13685335 13686737

Neighbor

gene id symbol gene type direction distance location
AMCG00008872 NA coding downstream 41960 13638657 ~ 13643375 (-)
AMCG00008873 NA coding downstream 76387 13585087 ~ 13608948 (-)
AMCG00008874 NA coding downstream 100504 13580416 ~ 13584831 (-)
AMCG00008869 NA coding downstream 145049 13537993 ~ 13540286 (-)
AMCG00008866 NA coding downstream 197716 13480978 ~ 13487619 (-)
AMCG00008878 NA coding upstream 33973 13720710 ~ 13734038 (-)
AMCG00008879 NA coding upstream 51145 13737882 ~ 13771390 (-)
AMCG00008882 ddx23 coding upstream 144470 13831207 ~ 13839926 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding upstream 179917 13866654 ~ 13881491 (-)
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding upstream 204543 13891280 ~ 13897417 (-)
G52019 NA non-coding downstream 229483 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 245709 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 385052 13299338 ~ 13300283 (-)
G51948 NA non-coding downstream 427716 13253853 ~ 13257619 (-)
G51947 NA non-coding downstream 469340 13214272 ~ 13215995 (-)
G52131 NA non-coding upstream 84823 13771560 ~ 13776929 (-)
G52157 NA non-coding upstream 136376 13823113 ~ 13830315 (-)
G52214 NA non-coding upstream 318990 14005727 ~ 14006439 (-)
G52233 LOC101154678 non-coding upstream 440502 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 585237 14271974 ~ 14275087 (-)
AMCG00008860 NA other downstream 360108 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 375910 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 423513 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 500979 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 587401 13090537 ~ 13097934 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 251714 13938451 ~ 13983893 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 1007093 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 1153970 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1345610 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1782937 15469674 ~ 15505517 (-)

Expression


Co-expression Network