G52187 (ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158)


Basic Information

Item Value
gene id G52187
gene name ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13938451 ~ 13983893 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65308
CTCGTAATGGAATTTTATCTTGGTGTCAGGAAGCATTCTAGAATTTACAagcataataaattatataaccACCACCCCCACAAATAATAACAAGCAATACGCAAACATTGTTGTATTTGATGGGAATGACAAATTATTacataaattcaaaataacactagataaatatatatagattattttCACAAGCTGTAATCTGCTGAACCGTTTAACATATTACGTTTAACACTATTTTCGATGAATAAgtaattgtttgatttttgatgTTTGATTTTAAACCGTCCCTTTATTATGAAATAGTACAAAAACATTCCAGAAAAACACCTTCACATATCTTCACTGCTGCTCATTGCTCAAGTCAGCCTACTactattattgataataatattaaatccACAACAATGGCTTCCAAGATGTCAGCCTGCATTGGTACACAGGGTGTGTACAGGTAACTTCCTGTCCATCTGTTCGTCTAACATCAATCAGCAGGAGGGGTGTGGTGTAACTGGCatctctgcagcagcagctgtgagAGAGACATCATACAGACAGCTATCTCTGGGGCTGCCCTCCGTCCATTTCCACCAGACACCCATCCATGAAAATGTGCTGGCTGTTGGGTGAAAAGCCTCACTAAAGCCTGCATGACTGATTTCAACAAAATTCAGTGTTGTTTATctctctctcactcactcactctggGCTTATATAAGGGATATGTTGGAAGGGAACAGTGTGTGAACGTGAAGGAAAAATCATACAGGACACCTGCAGTGTCTgacaactcacacacacacacaaaacaccctCTACCAAGGTGACTCAATTTGAAacccaatttatttatttttatagtctGGGATttaagagacagagaaagaacatTTAAACTTCATGGCAGACCCTTGTTCTCACATGGAAAGCTTTGGGAACTTACATCATTGCTTCCTCTGTGAAACAAGGAACTGGGCAGATATTACCCACTAGGTGCCACTATACACACAGTAAGCACTGCACCCACCGAAAGGTAGACAGGGGCCAACAAGTCAGTGTGCTCTTGAACGAaaaatgtgagtgtgtgtatatactatCTAGCACACTTGGCTGCGATCATCAGGTGGTATAATTGGTTAAGAAATTGCACATTTTGCAAAAAGCAGCAAAAAAGACTGACAAAGATGTGATAGGTATCTCCTTATATACAGTTTGTATATGTCAAACttgataaatacattatgtatatatatatatacatacacacacacacacaatgcatttaTAAGATAGCAGTTTCAATCGAGCATCACACAACCAGCATAGCTAAAAAAAGAGGGAGGCCACAGCtgaacagcaaaacaaaaaaaagatgaatcTCCACCAGCTGTACACagagaaactgcagacagacatacagaaattaaatatgaGTCTTAGACAGTTTATTAGAAAGATGTAGACAATAAAAAAATTTCCCACGGCATTCAACATAAACTGAAGACTTTCAGCCTGCTGGCAGCTGACAGGTTGACATACATACTAGGAATAgtgtattatcttttttttttttttcttcactcttGCATTTGTATTCTGACAGTGCAAATACAGTTTGGTCATCTACAATCGCTTTTTTTCTTCCGTTTCCGACTGAGAAGCAACAAAACGCACAGCTGGAACCCTTGGCGTCTCCACTTGGCGTGGAGGGAGGGTTAAACAAGCACCAAATGCACAGGCTTCTTTGTGCTGCACCTTATCTGgacatgtattttttgtttgtaattttcgCTTACATATGGAAGAAAGAAATCCACAATGTCCCAATTCCTGCTTCTCAATGCCGTATAAAACAATGAATGGGAGCGAATCACCACAAACAGCTTTGTTACTCTGTGGAGTAGATATCATATATACTGGACATGTTAAAGTGACGTCTGGAACGTGTACAGTTTTTAAAGCAGCAAAACTTAAACTGAATACTAAAAACAAGGGGGAGAATGGGGattgtggaagaaaaacaacccccaccaaaaacaaaacaaacaaaattaaaaaccacCACACTGGCACAAACAGATTAAGTATGAAAACCAGGCACCCTTAAGAACAAAGCAGAGCGGAAAATAAAACTACAGCcccagtatttaaaatgctgtattttatgATACTAACAAATGTTTATGAACATTACCTGcaactgtaaaacacatttaagaaaactgTTTTCTCTTATACTTCAGCTAAGACTCATTACATCAAAAGAatggacagaggttctgcagaTCACCCCACAAACACCACTGACTGAAGGGGGGGCAGGACAACTTTATTGaagtagaaaagaaaagaggtgTAATTCTTCACTGTTTAGCTTGCATTTGGTTTGTTGATCAGCAAAGGCCACTGACATTTCAATGAATACAGAGCCTCACTGATCtccacaaaacattaaaaaataataattaaaaaaaagtttattacTTTATTCAGGTTCAAACCTCTTTGCACATTTCTCACCACTGCCAGttctgatttgatttattttgggtgtttttttttttaaatttaataaatgactAAACCTCACAACAGCATAAAGACTCAGTGAACAGTCCATGCACaacagaacagaagaaaaatcagcACTGTAGGATGTGTGCAGACTGGACAGTGCTGTGGTATGTATATCAACCCTCAGTGATGCATTTTTCTCAAATGGTTGtaaatggctttaaaaaaaaataatggaaaaacaatggTCTTATCGCATGGCTACCAACTCAAatctaaacatgtttttcttgttttttgatttcttctttattattaacAGTTTTGTGATGATTCTTTCTTCCAACTGTATAAGGATTCCTATACTCCTTGTTTACTCCAAATCAGGCATTTTTTCATCATCGCTATCTGCCGATTCCtcATCTTCTGCCCCATCCACTTCTGGCAACTCATCCTCTCCACCCATGGTATTCATCATCTCTGAGAAGCGGTCGAAGCTGGACAATTCCTCATCTGAATCATCCTCCCAGTCCTTCCAGTTATTGAAGTCAACACTGAGCCAGTTAAGCTTcgccttttcttttgttaaccGGGGCCATGACTTCCCAGAATCTGCTTTCCGTAAACAACACAAGACAGACCGATCTGTCCGTTTGTTTTTGGATTCATTTGGATCGATAGCTTCAAAAAGTTCGATTTCATTGTGATGTTTGATGTTATCTGTACCACCAAGACAaCTGAAACCAAGTTTGGATTTTTCAAATTTTACTTGGACGTCTTTGCTGTCTTCCACACAGAATTCGATAAAGACATAGTCCCTTCTGTCATACCACTTTGCACTAGCAGGCTGCATCTCGGTTCTCTCAAGTCAGGATGCTGCGTTTTCTGTGGGGTTGTGCCGTGCGTGTCTCCGCTGTGGGCCGTGTCTACCTGCCGTGTTTTTGAATGAACAGTGTGCGGTTGTGAGGGGGGTTAAAGCCCGGCGCCGCTCTCTCCACTCCTCGCGTGTCTCGCCTCCTCGTTCGCGCAGTGACGCAGCAGCAGCGCGCGCTCTAGACGTTTCTAGAGCTTCCACTGCCCTCCCGCGCACACGGGCCG
>TU65310
TGGATGTGGTTTATTCAGCTGACAGTACATTCTACAGGATGCACATAGTGAGGTCACATCAGCACAACACAGCTCATAGCTTCCTTTAATGCCTCCtcttaaaaattatatattggtCCTAAAAATATAGAAAGGAATAAATTTAAAGTCACAAAAAactgtacattattaaaaattattCACTAAACACCACATTTTGGTTATAGAAAAAGTGTGTCCCTTCAGTGTAAAAAGgaactttttttctcaattttattttgcatttccttttttttttttttttttttctttcatagaCCAGTTTAAATTTCAGTGTAAGAAACCAGAACTTTTAAATACACCAGAACCACTCTTCTtctccctgccccccaccccccgtgaAGTCCTGCTGGGTCAGCGCCAGGATCGCATACAGTCTGGAGGAATGGAAGATAGgtaaatgggaaaaacaaaaaacaaaacaaaaaacaaacctaaagaacaaaaccaaaaaaacagaccagacaaaaaaaattaaaaaataaataaataaatacacacggCTCCTACACCCAAGACCAGATTAGCTTCACATGAAAACACCAGACAGGCCTGCGCATTGGCAGaactacagcaaaacaaaaggaatgCCGCTCAGAGGAAATGCTGCTGAATAGCTGGAACGGCAGCAGATAAGCGGCCAACCGGGTGGGCAGCCTGGAGCCCCAGAACAATTAGCAGACCcagaaatgcatacatacatacatacatacatacatacatacaacaacCGATTAAGCCAAATACCCTTTTAAGTCACTCAGAGTTCAGACTAAATGAGAACCAGAAGACCCAGTACGGACTCTCTGCAGaaccagggctgcagaccctGCTGTACAGGACTGTACTGCGTCTCTCTCCAGGACGAGCACTTTCTTGCCCCATTTGTATCGCTATTAATACAAGTTATTATTGACTAGTATACTCTATTTAGCACCTGAAAATTACATGAACTGAGATAAAGTGACAATCATACGAATGCACTGGCTGAAGGAGCAGGCGGCGGCTCTGGCGCAACGCAAACTGATAATGGATTATTGAACAAAATGCCTGGAGGTAGAGAGAGGGAACGGCAgctctgtttttcctttgtttttttaaatataggaaatttaaataaaacgaTCAAGAGCCCCTACCATGTTTCACACAGCTAGTGTCCCAGGCCTGGTTCTGACTGCGACAGACCTGCATCAGCATCCCTGCCAGCCTGAGGAACATGTCCGCCTCCCTGCCCCACTACCCCCCAGATGCACTGCGCTGTGGCCCTGGCACTGCTGGGGTTCTGCTACCCTCTCTGGAAAACTTAAACCTCCTCACACcggtttcctttaaaaaaataaaaacctttttgtCTGCACGTTACACTACTGACTTCACCAAAAGGATCAGACTAAAAAACTAAACCCTAGATTACACACTAAAACCCAGCTTCCTGGAGCTTATTATTGCCATCGAGAGTTTTCTAGTGTGTGAAATCTGCTTTAttcctttaaaatgcattaaaatcgTGGGTTGTTACTGTTAAAATGACATGAGTCACATCTGCGAATCTGCGCCACCCACATCGCACTGGTGGTCTGCTCCCGCCATTGGACTAAAGTTTTGTCAATTGAACTTAATCTTCTCTGAAGTTTATACGCAAtccctttcatttaaaaaaaataaaataaaaatacggGCAACTTGAAATTCCCAGCTTCTCGAGAGCTTAAAAACACGAATTAAGAGGCGGGGGGGAGGGAATTCGGTTCATTGGGGCGAGTCATTGGCTGCGCCACTGTAGGTCAGCTCCTTCACGAGCCCAGTTGGAAACGGGCACGGAAGCTCTGAGCTCGCAAGGACGAGACCGGGAAGATGCCAACCGTGACAGCcattaatcaaaatacaatctatataaaacaaacatgtaaagtGACTgatctaaaacaacaaaaatatagaaTGATTTTCCTCCAATTCCTCTGATAACAGTACTGAGAGTAAAGCAGCATGGGATATCGGGAACCCACTGCCCTACCTGAGGAGGGACagatactaaaaaaaaatatatatttttttttgctttttttttttgtactggccatttaatgcattttctagACATCACTAATATGTGGTCTGTACACATTCACTATAACCTATTGCTATTAAATAATCCCAGCTAATCTtgtatcttttatatatataatatatatatttaaaaaaaatgcttctaGTCAACAGACTGCTACACTATAGTCTTCTAATGAAGGGATATTTTACACCCAAactcttaaaaagaaaaattcaTCATATTCCCAAACTCCACCTGTTCCTTCCCTGCCTGGAGCAGCCCACACCTTTAATGAACGTGTGGATTTCATCATTATGGGGCAGCACTTCCCAAAGTGAACAGTCTGGGCTGGTCAAAACCACACAGACCAGAGGGGAGGGGATGCAGTGGAGTGTGGGTCAGAAACTCAGTCCATTTCAGTCCAGCAGGAGATGGGCAAGTGAAGCCCTGCCACCATCACAGCCACAGCCACAGCCCCCAGCCAACCCGCAAAAACAAACACGAATGCAACTACTGCCCCCTCGAGCACAGGAGTGTGACAGGGAGCAGAGGGGGTGGAGTGTTGTCTGGAGAGCCCAAGGAGTGACGCCACTGTGACTCCGGCACCAGACGCAGGAGTGAGGCAgggaataaaagaaaagatatatatatacaaaatacaaaaatacaaacaaaaccaaagccTGAGACACCCCAGAGAGGTTGAGGTTCACTGGACACGCCTTCACTTCCTGCCACATGGTGCACACATGTCAGAGTAGAAGAGTTTGTAAGAAACTAAaagGTTGACATACATACTAGGAATAgtgtattatcttttttttttttttcttcactcttGCATTTGTATTCTGACAGTGCAAATACAGTTTGGTCATCTACAATCGCTTTTTTTCTTCCGTTTCCGACTGAGAAGCAACAAAACGCACAGCTGGAACCCTTGGCGTCTCCACTTGGCGTGGAGGGAGGGTTAAACAAGCACCAAATGCACAGGCTTCTTTGTGCTGCACCTTATCTGgacatgtattttttgtttgtaattttcgCTTACATATGGAAGAAAGAAATCCACAATGTCCCAATTCCTGCTTCTCAATGCCGTATAAAACAATGAATGGGAGCGAATCACCACAAACAGCTTTGTTACTCTGTGGAGTAGATATCATATATACTGGACATGTTAAAGTGACGTCTGGAACGTGTACAGTTTTTAAAGCAGCAAAACTTAAACTGAATACTAAAAACAAGGGGGAGAATGGGGattgtggaagaaaaacaacccccaccaaaaacaaaacaaacaaaattaaaaaccacCACACTGGCACAAACAGATTAAGTATGAAAACCAGGCACCCTTAAGAACAAAGCAGAGCGGAAAATAAAACTACAGCcccagtatttaaaatgctgtattttatgATACTAACAAATGTTTATGAACATTACCTGcaactgtaaaacacatttaagaaaactgTTTTCTCTTATACTTCAGCTAAGACTCATTACATCAAAAGAatggacagaggttctgcagaTCACCCCACAAACACCACTGACTGAAGGGGGGGCAGGACAACTTTATTGaagtagaaaagaaaagaggtgTAATTCTTCACTGTTTAGCTTGCATTTGGTTTGTTGATCAGCAAAGGCCACTGACATTTCAATGAATACAGAGCCTCACTGATCtccacaaaacattaaaaaataataattaaaaaaaagtttattacTTTATTCAGGTTCAAACCTCTTTGCACATTTCTCACCACTGCCAGttctgatttgatttattttgggtgtttttttttttaaatttaataaatgactAAACCTCACAACAGCATAAAGACTCAGTGAACAGTCCATGCACaacagaacagaagaaaaatcagcACTGTAGGATGTGTGCAGACTGGACAGTGCTGTGGTATGTATATCAACCCTCAGTGATGCATTTTTCTCAAATGGTTGtaaatggctttaaaaaaaaataatggaaaaacaatggTCTTATCGCATGGCTACCAACTCAAatctaaacatgtttttcttgttttttgatttcttctttattattaacAGTTTTGTGATGATTCTTTCTTCCAACTGTATAAGGATTCCTATACTCCTTGTTTACTCCAAATCAGGCATTTTTTCATCATCGCTATCTGCCGATTCCtcATCTTCTGCCCCATCCACTTCTGGCAACTCATCCTCTCCACCCATGGTATTCATCATCTCTGAGAAGCGGTCGAAGCTGGACAATTCCTCATCTGAATCATCCTCCCAGTCCTTCCAGTTATTGAAGTCAACACTGAGCCAGTTAAGCTTcgccttttcttttgttaaccGGGGCCATGACTTCCCAGAATCTGCTTTCCGTAAACAACACAAGACAGACCGATCTGTCCGTTTGTTTTTGGATTCCTGCATGCAAAAATATCACGAGAGGAAAAAAGTATCAGGCAAAGCAAACGACCCTTCTGTTGGATTCACTATGTGAAATCTGACTGTCATTTAATATATAGCAGTTTTCCACAGGTTGTTTAAGCACCTCAGTGCCGAGGTGCTATAATTTTcaattgcattataaatattGAACCAATGCGCTTACATTATCGAAAtatcattttcagtgtttacatCAAGATTTTGAGACCTGGGCCACCATTTTGGTACGTACAAAGGCCGATGCCGAACAAATGCTTCCATTTGGCTGATGAGCAAATCACAATATCCAATTATACCCAAAGTTGCCGCCCCCAAGAGATGTTTGCGCTTACAGAAAATCCTGGggaagactgtgtgtgtgtgtg

Function

symbol description
ptges3a Predicted to enable Hsp90 protein binding activity; chaperone binding activity; and prostaglandin-E synthase activity. Predicted to be involved in several processes, including cellular protein-containing complex assembly; prostaglandin biosynthetic process; and telomere maintenance via telomerase. Predicted to be active in cytosol and nucleus. Is expressed in digestive system; endoderm; hindbrain neural keel; nervous system; and pronephric duct. Orthologous to human PTGES3 (prostaglandin E synthase 3).
ptges3 Enables several functions, including DNA polymerase binding activity; Hsp90 protein binding activity; and prostaglandin-E synthase activity. Involved in several processes, including cellular protein-containing complex assembly; chaperone cofactor-dependent protein refolding; and positive regulation of cellular metabolic process. Located in nucleus. Part of chaperone complex and telomerase holoenzyme complex. Biomarker of atherosclerosis; breast cancer; and oligodendroglioma.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65308 False 3606 TUCP 0.40 9 13938451 13949091
TU65310 True 4920 TUCP 0.41 6 13943998 13983893

Neighbor

gene id symbol gene type direction distance location
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding downstream 41034 13891280 ~ 13897417 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding downstream 56960 13866654 ~ 13881491 (-)
AMCG00008882 ddx23 coding downstream 98525 13831207 ~ 13839926 (-)
AMCG00008879 NA coding downstream 167061 13737882 ~ 13771390 (-)
AMCG00008878 NA coding downstream 204413 13720710 ~ 13734038 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding upstream 33457 14017350 ~ 14021503 (-)
AMCG00008890 NA coding upstream 57880 14041773 ~ 14042907 (-)
AMCG00008904 NA coding upstream 400676 14384569 ~ 14389388 (-)
AMCG00008907 NA coding upstream 406296 14390189 ~ 14393018 (-)
AMCG00008911 NA coding upstream 508277 14492170 ~ 14495264 (-)
G52157 NA non-coding downstream 108136 13823113 ~ 13830315 (-)
G52131 NA non-coding downstream 161522 13771560 ~ 13776929 (-)
G52019 NA non-coding downstream 482599 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 498825 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 638168 13299338 ~ 13300283 (-)
G52214 NA non-coding upstream 21834 14005727 ~ 14006439 (-)
G52233 LOC101154678 non-coding upstream 143346 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 288081 14271974 ~ 14275087 (-)
G52314 LOC105897838 non-coding upstream 377040 14360933 ~ 14365179 (-)
G52308 NA non-coding upstream 389698 14373591 ~ 14378330 (-)
G52099 NA other downstream 251714 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 613224 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 629026 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 676629 13257698 ~ 13261822 (-)
AMCG00008844 NA other downstream 754095 13135732 ~ 13184356 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 709937 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 856814 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1048454 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1485781 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1619932 15603825 ~ 15639130 (-)

Expression


Co-expression Network