G52214


Basic Information

Item Value
gene id G52214
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14005727 ~ 14006439 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65338
TCCTGGGGCAGGTctcaTCCTCTCATCTTCTCTCTTCTGTCTTCTCTCTTCTACTCtcatctcctctcctctccccttcctGGGGCAGGGCTCAGTGGCTcttgcccctctggtggatGATGTGCTCAAGGCTGGCTCTCTCTGTAGTGTCCAGGCTGATCTGGTACTTGGCCAGGATCTTTAGGATAGGCCGCAGTTTCAGCCACCACTGGTCCTTAGGGATCCTGTGcctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65338 True 233 lncRNA 0.56 2 14005727 14006439

Neighbor

gene id symbol gene type direction distance location
AMCG00008887 LOC103368342,LOC104967533,LOC101064836 coding downstream 108310 13891280 ~ 13897417 (-)
AMCG00008881 LOC103358261,LOC101472065,LOC103037018,LOC100705424,LOC104932892 coding downstream 124236 13866654 ~ 13881491 (-)
AMCG00008882 ddx23 coding downstream 165801 13831207 ~ 13839926 (-)
AMCG00008879 NA coding downstream 234337 13737882 ~ 13771390 (-)
AMCG00008878 NA coding downstream 271689 13720710 ~ 13734038 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding upstream 10911 14017350 ~ 14021503 (-)
AMCG00008890 NA coding upstream 35334 14041773 ~ 14042907 (-)
AMCG00008904 NA coding upstream 378130 14384569 ~ 14389388 (-)
AMCG00008907 NA coding upstream 383750 14390189 ~ 14393018 (-)
AMCG00008911 NA coding upstream 485731 14492170 ~ 14495264 (-)
G52157 NA non-coding downstream 175412 13823113 ~ 13830315 (-)
G52131 NA non-coding downstream 228798 13771560 ~ 13776929 (-)
G52019 NA non-coding downstream 549875 13373383 ~ 13455852 (-)
G52041 NA non-coding downstream 566101 13438088 ~ 13439626 (-)
G51965 NA non-coding downstream 705444 13299338 ~ 13300283 (-)
G52233 LOC101154678 non-coding upstream 120800 14127239 ~ 14127501 (-)
G52296 NA non-coding upstream 265535 14271974 ~ 14275087 (-)
G52314 LOC105897838 non-coding upstream 354494 14360933 ~ 14365179 (-)
G52308 NA non-coding upstream 367152 14373591 ~ 14378330 (-)
G52355 NA non-coding upstream 507438 14513877 ~ 14514078 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 21834 13938451 ~ 13983893 (-)
G52099 NA other downstream 318990 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 680500 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 696302 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 743905 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 687391 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 834268 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 1025908 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 1463235 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1597386 15603825 ~ 15639130 (-)

Expression


Co-expression Network