G52362


Basic Information

Item Value
gene id G52362
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14542066 ~ 14542499 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65530
cacacacacaatatataaagaaaactaTGAAAACAGCACATGATGGCACGTTCACcaggtaaaacaaacaataatataacatgaaattaaatctaACCCCACCCCCCTTTTTGGCTGTAAAATAAGTACTTGGggaaaaacctaaaataaacacCCAGACAGCATCTCAACAGTGAAAGAAACAAGATGTTTGGGAGGGAGCCAACAGTTCGCCACATCGCCCCCTGGCCCCATGCTGTCCGGCGGGTGTATCAGTGGCTGTACACCTTGCTCCACTCCATGCAGGTGTCCAGCTCTTTGGGCGTGGCGTGGGGCCGCACTTTGCAGAAGGCATTCTCGAAGTCCTTGAAGGAGAGGGGCAGGGCAGGCAGGCTATGCAGGGGCGTGGGGGGGGCGCTGGCGCTGGCCGAGGCGGCAGCCTGCTGGCAGAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65530 True 434 lncRNA 0.53 1 14542066 14542499

Neighbor

gene id symbol gene type direction distance location
AMCG00008911 NA coding downstream 46802 14492170 ~ 14495264 (-)
AMCG00008907 NA coding downstream 149048 14390189 ~ 14393018 (-)
AMCG00008904 NA coding downstream 152678 14384569 ~ 14389388 (-)
AMCG00008890 NA coding downstream 499159 14041773 ~ 14042907 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding downstream 520563 14017350 ~ 14021503 (-)
AMCG00008915 LOC106583168 coding upstream 27953 14570452 ~ 14587950 (-)
AMCG00008916 NA coding upstream 63477 14605976 ~ 14612227 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding upstream 110951 14653450 ~ 14666770 (-)
AMCG00008913 NA coding upstream 128942 14671441 ~ 14681624 (-)
AMCG00008924 myl6b,zgc:153867,LOC105013534,LOC106950810 coding upstream 214140 14756639 ~ 14765251 (-)
G52355 NA non-coding downstream 27988 14513877 ~ 14514078 (-)
G52308 NA non-coding downstream 163736 14373591 ~ 14378330 (-)
G52314 LOC105897838 non-coding downstream 176887 14360933 ~ 14365179 (-)
G52296 NA non-coding downstream 266979 14271974 ~ 14275087 (-)
G52233 LOC101154678 non-coding downstream 414565 14127239 ~ 14127501 (-)
G52363 NA non-coding upstream 57 14542556 ~ 14545750 (-)
G52387 NA non-coding upstream 55468 14597967 ~ 14598418 (-)
G52421 NA non-coding upstream 189624 14732123 ~ 14733797 (-)
G52518 NA non-coding upstream 452071 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 452417 14994916 ~ 15023128 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 558173 13938451 ~ 13983893 (-)
G52099 NA other downstream 855329 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1216839 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1232641 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 1280244 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 151331 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 298208 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 489848 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 927175 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1061326 15603825 ~ 15639130 (-)

Expression


Co-expression Network