G52363


Basic Information

Item Value
gene id G52363
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14542556 ~ 14545750 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65531
GTAATCTCTTTAATACTGCTCAATACTTCTCTTAAAATACAGTCTCTTCTGAGGTAGACCATTAGagttcaaaacattatttttaaaacagacatcaaaaaagacatgaaataaatactttcatgTACAATATGTTGCAAAAATGAGGTAGAAATGGTTACAGAGAATGTACAAGATACAAGAACAAAGTtactaaaaaaataaggaattcGCAATTAAATACCATATTTGTTGGACAAACCGTTTTTGTGTGAAAGTACCGCTCCACAGCCCCAGTAACCCAGTAAAAACAACTGCTTGTGTCCACCTGAGCAAATAATTAGTTCAGTAATTGATCCTTCAAGTCCTTAACTCTCCATTTCACTGGCTTAAATGGGCCAATGTACCTACCATGGCCAGGGCTCAGAGTGCTGGTTGACTAAGAGCTGCAGACACTGCAGACACTGCAGGATCAGAACTGAGGGCCACTGGCTTACGGGCCGTATCGCATGGGTATCTGATGAAAACATAATAGAGAGCAATAAAAGATGGCCAAGAGGAGCTGTGTGACCATAGGCACTGTGCCCGCTTAGCAGGACTCCTGTACAGACAGCTGCTTTCACAGCATTGCCTTCACTGGTAGTCACAGTCAATGGAAACAATAGGTAAAGCGCATGCTGTGCCAGAAACCTGCAGGGGAACAGACTGGCATCCGAAAACCACTGTGCTGGAATGGCACTATGACTcacagcactctctctctctctctctctctctctctctggggatAGCAGCTGTGTATCTGTAATTAAACATGTGAGAAGTACAGAGGGGACATGAACAGGAATAGAtctataaacataaatataaaagaaaagaacattttgtagccacactctcacattagttatttagaccagacatttatattattaaaatttcattttattgaatcacCCACAACGCGTTTCGacactactgtgtcttcatcaggtatATAATGTAGTTTATAGATCTATTCCTTTtcatgtgtgggtgtgtatattaattttgttttcagcagTTATGAATACATAACATCACTGTTTGCTGTGACTGTTCTTCAGAAATGCTtctaacaaaaactaaactgcATCATACTTCCAGGACAAACAATGTTGAGTAGGAGTGGGATACGTGTccgaaatatatatattattgtttgtttccaaaCATTGGATCAATGTGTAGAGGTCATTCTGACTGACCTGGCATCTCTAGCTTAACTGAAGCCACCAGCTGTACTTGAAGAGCTGAATAGTAATATAGGGTTACTGGACATCAATCAGGGCATCCCTGCTCAGAGGggttgtgtgtgggggagggagaAAGGAGTCACATCACTGCACGCTGCACAGCACACTGCAATCCATCATTTtaaagatggagagagggagagagagagatcctttCTGACCCGTGTTTCTGGATGAAACTGACCGAGAGACTCAGCTCTGACTGCACTACAGCCAGGCAGCCCCCACAGCTTGGGATTGTCTGGGTTTTGcagtgaaaatatacattatagaCTGGATCACAGCTGCCCTGCCTACTGGGCTCCTGCACAGGGCTCTGTCGTGGCCAGTACCTCAGTCACATTACTGGACTGATTATCAATCAATTCAGTAACTCAAGAGCTGGCTGAGCAGCAGCACCGCAAGAACAATGCCCTGACAGCTGGGAATCAGTGCCTCATAGGATTTGATGAACAAGTGCACGTATATAGACAATTATGATATGATTATTTCAGTATGGGTCCATCACTCTAATAGTTTTTTAAAGCAGGCAGGCACCCAGGCTGACCATTGAGAGAGCTGTGGGCTGTCAGGGGCTCGACTGCACAAAATCGCCAGGAAACGGTTTGtccaaaactaaactaaacaaaaaaccttttatacttttttttttcccattccttttttttcctcttagtCTACTGAACACATCATAACATGACAAACATCACTCCACCAAACTctacagtaaaaataaagtgagataggggaagaaaatatatatatatatatatagatatatataattaaaaacatggattTATGGCATCAAATATCCTTTGTAAAATACCTGAATTACATTCATCGTTAGTCTTGGTAACAACTTCAAGTTTGTCTCCCGAGGTAAACGCTCAGCTGCTCTGTGATCTCCACGGGCAGCcccgcccccccagcccccccacaGTGCTGCGGGGGGCTCAtacattctttttttcattctgagGTAAAGAAATTCTTCCTGAGTATTTGGAAACAAGACTacatagataaaaaaaaaactaaataaagcaacaacagaaaaacaaacaatcgtCAAAAACGTTAAATAAAGCAAGCCCAAGGGCTGTTGACAAACCCCcctttcaaagccagtgtgtCAGAGACTGAAGCCGCCTATTCACATATGGGTCGAGCTGATTAGACAGACAGCAGGTATCCAGAACACTGCGCTGCACTGACATGTACCTGCATCGCTTTTCACAGCTTTCCTGCAGGGGGCGACTCTGCTACCATTCCCTTCATTGTTGAGGATTCTGGCCTGTTCCTGTGTGGCAGGGCTCTCTGATTCTGTCGGAAAGCTGTGGCAAAACTGCCAATGTGAGAACAGAGATCAGAGCCTGGTAAATATGCCCTTCTTTACTCAATTCTTGCAGCAGTGCCAAACTCAGAACATTGTGTCAGGTACTCTTGCTTTGTTTGCAAATCTGTACCTCAGTTTAGATTGGGTAGTGCTGGGAACTGAGCACAGCAGGATCAATGTGCTGTAAGGCTGTGCTCTGCAGCAGGGGTTCAGTCGTGATCTGGGATTGATGCACACTGACATTGCTGCTTATTTTTGGTCTAGATTAGTCTTTTGTCTTTCTGAAGGTTATCTTGCAATCCCAAGCCCTTAACATACCACCAGGCCagtgaaacaataaaataaaaaacagaaaacaaaacaaaaccagcacaGAACAACGCCACGGGTGCAGACTGATAATAAATAGGAACCTGAGAGTAGCAATCTACATGACATCATTAAGACTGCCCATTTCACCACACCCCCGACCCTCGCCTCAAGAAAGGTTTATTCATTTGGCTCTTTGGggattgaaaaacataatatatatatgttttttttttttttacatatgtgtatatatgcacatatatatgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65531 True 3195 lncRNA 0.42 1 14542556 14545750

Neighbor

gene id symbol gene type direction distance location
AMCG00008911 NA coding downstream 47292 14492170 ~ 14495264 (-)
AMCG00008907 NA coding downstream 149538 14390189 ~ 14393018 (-)
AMCG00008904 NA coding downstream 153168 14384569 ~ 14389388 (-)
AMCG00008890 NA coding downstream 499649 14041773 ~ 14042907 (-)
AMCG00008891 neurod4,LOC105013535,LOC106567036 coding downstream 521053 14017350 ~ 14021503 (-)
AMCG00008915 LOC106583168 coding upstream 24702 14570452 ~ 14587950 (-)
AMCG00008916 NA coding upstream 60226 14605976 ~ 14612227 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding upstream 107700 14653450 ~ 14666770 (-)
AMCG00008913 NA coding upstream 125691 14671441 ~ 14681624 (-)
AMCG00008924 myl6b,zgc:153867,LOC105013534,LOC106950810 coding upstream 210889 14756639 ~ 14765251 (-)
G52362 NA non-coding downstream 57 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 28478 14513877 ~ 14514078 (-)
G52308 NA non-coding downstream 164226 14373591 ~ 14378330 (-)
G52314 LOC105897838 non-coding downstream 177377 14360933 ~ 14365179 (-)
G52296 NA non-coding downstream 267469 14271974 ~ 14275087 (-)
G52387 NA non-coding upstream 52217 14597967 ~ 14598418 (-)
G52421 NA non-coding upstream 186373 14732123 ~ 14733797 (-)
G52518 NA non-coding upstream 448820 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 449166 14994916 ~ 15023128 (-)
G52594 NA non-coding upstream 623572 15169322 ~ 15172366 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 558663 13938451 ~ 13983893 (-)
G52099 NA other downstream 855819 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1217329 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1233131 13307422 ~ 13309425 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other downstream 1280734 13257698 ~ 13261822 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other upstream 148080 14693830 ~ 14715322 (-)
AMCG00008923 NA other upstream 294957 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 486597 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 923924 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 1058075 15603825 ~ 15639130 (-)

Expression


Co-expression Network