G52513


Basic Information

Item Value
gene id G52513
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14994916 ~ 15023128 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65718
TGTTAATGTATTATAGTGCAGTAGTGTAATAAACTATcaggtttcagttttattttaaatagttattttaattgatttctttgtgcttaaagaacaaaaatgcaGGGAAGCCACTCGTTacaaaacaagagagagagagaggaatagaCAGACAGTGCAGTACACTACATTAACTGCACTGAGAGAAACCgtgcagtgcgtgtgtgtgtgtagatgctGTGTAGATGCACAGAGTACTGAAATGCTGACTAACATTAGCACACTAGACTTGACAAGTGTGTagtattgtattattctgtGTTGTACTACACTATACTCATGTGTTGTATTGTGAAGTACTTGTGTTGTGAGGCTTTGTCCTGCTGTACTGCTCTGTATTATATTGtgttgtactgcactgcactatcaGAATTGCTGCTGTTGCTATAGGAACCACAGCCCCTCGAACATGCTTCAAGTTCTGAGGGTCTGGGCTGGGAAGCTGAACAAACAGAATggcaatacagaaacaaattatagtaattatagtAATACAGTGATAAATTGCCCCATTAAGTAcaagtcattatatatatatatatatatatacacacacacacacacacacacacatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65718 True 618 lncRNA 0.37 2 14994916 15023128

Neighbor

gene id symbol gene type direction distance location
AMCG00008929 NA coding downstream 101689 14868827 ~ 14893227 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding downstream 175920 14811874 ~ 14818996 (-)
AMCG00008927 NA coding downstream 189250 14800769 ~ 14805666 (-)
AMCG00008926 NA coding downstream 197439 14796350 ~ 14797477 (-)
AMCG00008925 NA coding downstream 224486 14766956 ~ 14770430 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding upstream 43796 15066924 ~ 15070781 (-)
AMCG00008939 NA coding upstream 55937 15079065 ~ 15087219 (-)
AMCG00008938 NA coding upstream 86655 15109783 ~ 15112295 (-)
AMCG00008940 NA coding upstream 113275 15136403 ~ 15152205 (-)
AMCG00008937 NA coding upstream 153488 15176616 ~ 15182566 (-)
G52421 NA non-coding downstream 261119 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 396498 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 449166 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 452417 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 480838 14513877 ~ 14514078 (-)
G52594 NA non-coding upstream 146194 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 214927 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 257768 15280896 ~ 15284268 (-)
G52676 NA non-coding upstream 392817 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 403788 15426916 ~ 15428651 (-)
AMCG00008923 NA other downstream 128928 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 279594 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1011023 13938451 ~ 13983893 (-)
G52099 NA other downstream 1308179 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1669689 13316867 ~ 13325227 (-)
AMCG00008934 NA other upstream 9219 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 446546 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 580697 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 810912 15834040 ~ 15851810 (-)
G52782 NA other upstream 813861 15836989 ~ 15837801 (-)

Expression


Co-expression Network