G52518


Basic Information

Item Value
gene id G52518
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14994570 ~ 15006197 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65723
gtgtgttttatgttacgTTCCCCTTATCCTCTTACATCAGCCACTTGGGGTCGTAACAGtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcctccattgctccgtggtccagttctgatgctcacgtgcccattgtaggcgcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65723 True 213 lncRNA 0.51 2 14994570 15006197

Neighbor

gene id symbol gene type direction distance location
AMCG00008929 NA coding downstream 101343 14868827 ~ 14893227 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding downstream 175574 14811874 ~ 14818996 (-)
AMCG00008927 NA coding downstream 188904 14800769 ~ 14805666 (-)
AMCG00008926 NA coding downstream 197093 14796350 ~ 14797477 (-)
AMCG00008925 NA coding downstream 224140 14766956 ~ 14770430 (-)
AMCG00008933 syt3,LOC107732896,LOC107563990,LOC107551154 coding upstream 60727 15066924 ~ 15070781 (-)
AMCG00008939 NA coding upstream 72868 15079065 ~ 15087219 (-)
AMCG00008938 NA coding upstream 103586 15109783 ~ 15112295 (-)
AMCG00008940 NA coding upstream 130206 15136403 ~ 15152205 (-)
AMCG00008937 NA coding upstream 170419 15176616 ~ 15182566 (-)
G52421 NA non-coding downstream 260773 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 396152 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 448820 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 452071 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 480492 14513877 ~ 14514078 (-)
G52594 NA non-coding upstream 163125 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 231858 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 274699 15280896 ~ 15284268 (-)
G52676 NA non-coding upstream 409748 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 420719 15426916 ~ 15428651 (-)
AMCG00008923 NA other downstream 128582 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 279248 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1010677 13938451 ~ 13983893 (-)
G52099 NA other downstream 1307833 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1669343 13316867 ~ 13325227 (-)
AMCG00008934 NA other upstream 26150 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 463477 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 597628 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 827843 15834040 ~ 15851810 (-)
G52782 NA other upstream 830792 15836989 ~ 15837801 (-)

Expression


Co-expression Network