G52619


Basic Information

Item Value
gene id G52619
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15236702 ~ 15236924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65847
GGCATCTTGAAAAGCTTCCAAAAATTATTGAGATTTGCCTGGATACATCTGTCGCACTAATGTGGTGATGTGTAATTTATCTCTCGGGTTTTTGAAAATAACCATATATTTGGTGTTTAAAGTAATAGTTCTACTTTTACGTCcctgacaaaacacattctgtacaatatataaaatactgaggtTTCTGTGGTGCACGTATTGAGTGAAGGCTTTTTCAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65847 True 223 lncRNA 0.35 1 15236702 15236924

Neighbor

gene id symbol gene type direction distance location
AMCG00008941 LOC107560742,LOC106601920 coding upstream 33749 15182788 ~ 15202953 (+)
AMCG00008935 NA coding upstream 100681 15133336 ~ 15136021 (+)
AMCG00008936 NA coding upstream 137522 15098166 ~ 15099180 (+)
AMCG00008932 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107674129 coding upstream 171694 15050695 ~ 15065008 (+)
AMCG00008930 NA coding upstream 191279 15032734 ~ 15045423 (+)
AMCG00008947 LOC107554102,LOC107730730 coding downstream 256804 15493728 ~ 15494128 (+)
AMCG00008946 NA coding downstream 270386 15507310 ~ 15513137 (+)
AMCG00008948 NA coding downstream 281257 15518181 ~ 15519179 (+)
AMCG00008949 NA coding downstream 282705 15519629 ~ 15522296 (+)
AMCG00008955 NA coding downstream 362407 15599331 ~ 15608308 (+)
G52614 NA non-coding upstream 11182 15225045 ~ 15225520 (+)
G52580 NA non-coding upstream 111201 15124587 ~ 15125501 (+)
G52493 NA non-coding upstream 209120 15026718 ~ 15027582 (+)
G52497 NA non-coding upstream 254193 14982123 ~ 14982509 (+)
G52430 NA non-coding upstream 405225 14766211 ~ 14831477 (+)
G52628 NA non-coding downstream 9974 15246898 ~ 15247191 (+)
G52632 NA non-coding downstream 45776 15282700 ~ 15283545 (+)
G52651 NA non-coding downstream 175077 15412001 ~ 15431601 (+)
G52691 NA non-coding downstream 276611 15513535 ~ 15514018 (+)
G52717 NA non-coding downstream 390916 15627840 ~ 15703015 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 215856 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 424945 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 441518 14783043 ~ 14795184 (+)
AMCG00008917 smarcc2 other upstream 482058 14738449 ~ 14754644 (+)
AMCG00008910 NA other upstream 694454 14527818 ~ 14542248 (+)
AMCG00008960 rps11,rs11 other downstream 619300 15856224 ~ 15863670 (+)
AMCG00008965 NA other downstream 658506 15895430 ~ 15910151 (+)
G52942 NA other downstream 1125178 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 1342939 16579863 ~ 16587381 (+)
G53028 NA other downstream 1435579 16672503 ~ 16673542 (+)

Expression


Co-expression Network