G52632


Basic Information

Item Value
gene id G52632
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15282700 ~ 15283545 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65860
AGCGGTAAAACGGGCCGTTGCTTTAAGTTTCAACAGAGGTTTCAGATCGATTAAACATGGATTTCTAACGTCACCCCGAAGGAAGGAATAATTGTATCTTGTTGTAATTATTACTCAGGGATTTGTGTTGATTCAGCCCATGGTGTGATGAGAAAGTTTGCAGTGGTCCAATGGGTCAGTGAGGAGGATGCTGGGATGTATAGCGAGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65860 True 210 lncRNA 0.44 2 15282700 15283545

Neighbor

gene id symbol gene type direction distance location
AMCG00008941 LOC107560742,LOC106601920 coding upstream 79747 15182788 ~ 15202953 (+)
AMCG00008935 NA coding upstream 146679 15133336 ~ 15136021 (+)
AMCG00008936 NA coding upstream 183520 15098166 ~ 15099180 (+)
AMCG00008932 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107674129 coding upstream 217692 15050695 ~ 15065008 (+)
AMCG00008930 NA coding upstream 237277 15032734 ~ 15045423 (+)
AMCG00008947 LOC107554102,LOC107730730 coding downstream 210183 15493728 ~ 15494128 (+)
AMCG00008946 NA coding downstream 223765 15507310 ~ 15513137 (+)
AMCG00008948 NA coding downstream 234636 15518181 ~ 15519179 (+)
AMCG00008949 NA coding downstream 236084 15519629 ~ 15522296 (+)
AMCG00008955 NA coding downstream 315786 15599331 ~ 15608308 (+)
G52628 NA non-coding upstream 35509 15246898 ~ 15247191 (+)
G52619 NA non-coding upstream 45776 15236702 ~ 15236924 (+)
G52614 NA non-coding upstream 57180 15225045 ~ 15225520 (+)
G52580 NA non-coding upstream 157199 15124587 ~ 15125501 (+)
G52493 NA non-coding upstream 255118 15026718 ~ 15027582 (+)
G52651 NA non-coding downstream 128456 15412001 ~ 15431601 (+)
G52691 NA non-coding downstream 229990 15513535 ~ 15514018 (+)
G52717 NA non-coding downstream 344295 15627840 ~ 15703015 (+)
G52766 NA non-coding downstream 480392 15763937 ~ 15764143 (+)
G52781 NA non-coding downstream 553440 15836985 ~ 15837809 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 261854 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 470943 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 487516 14783043 ~ 14795184 (+)
AMCG00008917 smarcc2 other upstream 528056 14738449 ~ 14754644 (+)
AMCG00008910 NA other upstream 740452 14527818 ~ 14542248 (+)
AMCG00008960 rps11,rs11 other downstream 572679 15856224 ~ 15863670 (+)
AMCG00008965 NA other downstream 611885 15895430 ~ 15910151 (+)
G52942 NA other downstream 1078557 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 1296318 16579863 ~ 16587381 (+)
G53028 NA other downstream 1388958 16672503 ~ 16673542 (+)

Expression


Co-expression Network