Gene
RNA
| Item | Value |
|---|---|
| gene id | G52651 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 15412001 ~ 15431601 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU65882 | True | 856 | lncRNA | 0.48 | 3 | 15412001 | 15431601 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008941 | LOC107560742,LOC106601920 | coding | upstream | 209048 | 15182788 ~ 15202953 (+) |
| AMCG00008935 | NA | coding | upstream | 275980 | 15133336 ~ 15136021 (+) |
| AMCG00008936 | NA | coding | upstream | 312821 | 15098166 ~ 15099180 (+) |
| AMCG00008932 | si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107674129 | coding | upstream | 346993 | 15050695 ~ 15065008 (+) |
| AMCG00008930 | NA | coding | upstream | 366578 | 15032734 ~ 15045423 (+) |
| AMCG00008947 | LOC107554102,LOC107730730 | coding | downstream | 62127 | 15493728 ~ 15494128 (+) |
| AMCG00008946 | NA | coding | downstream | 75709 | 15507310 ~ 15513137 (+) |
| AMCG00008948 | NA | coding | downstream | 86580 | 15518181 ~ 15519179 (+) |
| AMCG00008949 | NA | coding | downstream | 88028 | 15519629 ~ 15522296 (+) |
| AMCG00008955 | NA | coding | downstream | 167730 | 15599331 ~ 15608308 (+) |
| G52632 | NA | non-coding | upstream | 128456 | 15282700 ~ 15283545 (+) |
| G52628 | NA | non-coding | upstream | 164810 | 15246898 ~ 15247191 (+) |
| G52619 | NA | non-coding | upstream | 175077 | 15236702 ~ 15236924 (+) |
| G52614 | NA | non-coding | upstream | 186481 | 15225045 ~ 15225520 (+) |
| G52580 | NA | non-coding | upstream | 286500 | 15124587 ~ 15125501 (+) |
| G52691 | NA | non-coding | downstream | 81934 | 15513535 ~ 15514018 (+) |
| G52717 | NA | non-coding | downstream | 196239 | 15627840 ~ 15703015 (+) |
| G52766 | NA | non-coding | downstream | 332336 | 15763937 ~ 15764143 (+) |
| G52781 | NA | non-coding | downstream | 405384 | 15836985 ~ 15837809 (+) |
| G52798 | NA | non-coding | downstream | 448456 | 15880057 ~ 15895419 (+) |
| AMCG00008931 | pp12c,LOC106564933 | other | upstream | 391155 | 14982573 ~ 15020846 (+) |
| AMCG00008919 | zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 | other | upstream | 600244 | 14807297 ~ 14811757 (+) |
| AMCG00008920 | NA | other | upstream | 616817 | 14783043 ~ 14795184 (+) |
| AMCG00008917 | smarcc2 | other | upstream | 657357 | 14738449 ~ 14754644 (+) |
| AMCG00008910 | NA | other | upstream | 869753 | 14527818 ~ 14542248 (+) |
| AMCG00008960 | rps11,rs11 | other | downstream | 424623 | 15856224 ~ 15863670 (+) |
| AMCG00008965 | NA | other | downstream | 463829 | 15895430 ~ 15910151 (+) |
| G52942 | NA | other | downstream | 930501 | 16362102 ~ 16362511 (+) |
| AMCG00008983 | NA | other | downstream | 1148262 | 16579863 ~ 16587381 (+) |
| G53028 | NA | other | downstream | 1240902 | 16672503 ~ 16673542 (+) |
