G52666


Basic Information

Item Value
gene id G52666
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15280896 ~ 15284268 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU65897
AGTCTCTGTTTTGCGCGGATGGGCGGTCGGAGCGCGTTAAGGGTTTTCTGTTAGAACGCTGTCGTTAATGAATGATCTTCGCATGAAAATCGAAAAATGTCTACATGACTTGGAGGAGGGATATTTCCAGAGTGCCACTAATGATGATGATGTTTCGCACTCACCAAAGGGGACTGAAGAATCCGCCCCCACAGATATAGGCCTACAGgacaatatattattacaagCAGAGACCACAAGAGAGTTACCATCCATAGAAAAACAGGTGAGGAaaggttttgtttaaatgtcctCCAGCTGTCAGTAAGGCATATGGATACTGAGGATGACCAAAG

Function

GO: NA

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
TU65897 True 335 lncRNA 0.44 4 15280896 15284268

Neighbor

gene id symbol gene type direction distance location
AMCG00008942 NA coding downstream 76240 15202268 ~ 15204656 (-)
AMCG00008937 NA coding downstream 98330 15176616 ~ 15182566 (-)
AMCG00008940 NA coding downstream 128691 15136403 ~ 15152205 (-)
AMCG00008938 NA coding downstream 168601 15109783 ~ 15112295 (-)
AMCG00008939 NA coding downstream 193677 15079065 ~ 15087219 (-)
AMCG00008943 NA coding upstream 17574 15301842 ~ 15328145 (-)
AMCG00008944 NA coding upstream 88277 15372545 ~ 15391050 (-)
AMCG00008945 NA coding upstream 115311 15399579 ~ 15400121 (-)
AMCG00008950 NA coding upstream 230366 15514634 ~ 15528761 (-)
AMCG00008956 NA coding upstream 258194 15542462 ~ 15596322 (-)
G52621 NA non-coding downstream 41781 15238055 ~ 15239115 (-)
G52594 NA non-coding downstream 108530 15169322 ~ 15172366 (-)
G52513 NA non-coding downstream 257768 14994916 ~ 15023128 (-)
G52518 NA non-coding downstream 274699 14994570 ~ 15006197 (-)
G52421 NA non-coding downstream 547099 14732123 ~ 14733797 (-)
G52676 NA non-coding upstream 131677 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 142648 15426916 ~ 15428651 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding upstream 222980 15507248 ~ 15513223 (-)
G52774 NA non-coding upstream 536918 15821186 ~ 15822218 (-)
G52793 NA non-coding upstream 575255 15859523 ~ 15863705 (-)
AMCG00008934 NA other downstream 223690 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 414908 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 565574 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1297003 13938451 ~ 13983893 (-)
G52099 NA other downstream 1594159 13685335 ~ 13686737 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 185406 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 319557 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 549772 15834040 ~ 15851810 (-)
G52782 NA other upstream 552721 15836989 ~ 15837801 (-)
G52834 NA other upstream 673399 15957667 ~ 15963617 (-)

Expression


Co-expression Network