G52774


Basic Information

Item Value
gene id G52774
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15821186 ~ 15822218 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66047
aaggaattgtctgtagaccgccgagacaggattgtatagaggcacagatctgggaaagggtacagaaaaaattctgcagcattgaaggtcccaatgagcacagtggcaggtcctgcaaagaagaatgggagaaactgcccaaaaataggtgtgccaagcttgtagcatcatactcaaaaagacttgaggctgtaattggtgccaaaggtgcttcaacaaagtattgagcaaaggctgtgaatacttatgtacatgtgcttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66047 True 269 lncRNA 0.43 2 15821186 15822218

Neighbor

gene id symbol gene type direction distance location
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 19813 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 136136 15667816 ~ 15685050 (-)
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding downstream 160690 15649544 ~ 15660496 (-)
AMCG00008956 NA coding downstream 224864 15542462 ~ 15596322 (-)
AMCG00008950 NA coding downstream 292425 15514634 ~ 15528761 (-)
AMCG00008962 NA coding upstream 5482 15827700 ~ 15830629 (-)
AMCG00008961 NA coding upstream 30996 15853214 ~ 15857199 (-)
AMCG00008968 NA coding upstream 73470 15895688 ~ 15898166 (-)
AMCG00008973 NA coding upstream 394320 16216538 ~ 16233132 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 451586 16273804 ~ 16289372 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding downstream 307963 15507248 ~ 15513223 (-)
G52676 NA non-coding downstream 343249 15415945 ~ 15477937 (-)
G52683 NA non-coding downstream 392535 15426916 ~ 15428651 (-)
G52666 NA non-coding downstream 536918 15280896 ~ 15284268 (-)
G52621 NA non-coding downstream 582071 15238055 ~ 15239115 (-)
G52793 NA non-coding upstream 37305 15859523 ~ 15863705 (-)
G52794 NA non-coding upstream 43530 15865748 ~ 15865986 (-)
G52808 NA non-coding upstream 83655 15905873 ~ 15908407 (-)
G52809 NA non-coding upstream 86446 15908664 ~ 15910151 (-)
G52812 NA non-coding upstream 108357 15930575 ~ 15931134 (-)
AMCG00008957 NA other downstream 182056 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 315669 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 763980 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 955198 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 1105864 14693830 ~ 14715322 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 11822 15834040 ~ 15851810 (-)
G52782 NA other upstream 14771 15836989 ~ 15837801 (-)
G52834 NA other upstream 135449 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 241336 16063554 ~ 16073935 (-)
G52951 NA other upstream 582492 16404710 ~ 16405126 (-)

Expression


Co-expression Network