G52814


Basic Information

Item Value
gene id G52814
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15940096 ~ 15940302 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66117
ATCTGtctattcaataagcaggagctggacccaattgTCATCGTGCGGGGGGGCATGGTACTCGTGAGGgattatgtcaatctggaggtcctaCAGAGGGGCAAgaaggaagcctttaagaactggcagatacaagatctgggggagctcaggatcccatgatgggacccacctccggggacggtcatctccccctgctggagcccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66117 True 207 lncRNA 0.56 1 15940096 15940302

Neighbor

gene id symbol gene type direction distance location
AMCG00008968 NA coding downstream 41930 15895688 ~ 15898166 (-)
AMCG00008961 NA coding downstream 82897 15853214 ~ 15857199 (-)
AMCG00008962 NA coding downstream 109467 15827700 ~ 15830629 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 138723 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 255046 15667816 ~ 15685050 (-)
AMCG00008973 NA coding upstream 276236 16216538 ~ 16233132 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 333502 16273804 ~ 16289372 (-)
AMCG00008977 LOC106517428,LOC102198306 coding upstream 353014 16293316 ~ 16298256 (-)
AMCG00008976 LOC107551165 coding upstream 379066 16319368 ~ 16322631 (-)
AMCG00008975 NA coding upstream 396113 16336415 ~ 16338708 (-)
G52812 NA non-coding downstream 8962 15930575 ~ 15931134 (-)
G52809 NA non-coding downstream 29945 15908664 ~ 15910151 (-)
G52808 NA non-coding downstream 31689 15905873 ~ 15908407 (-)
G52794 NA non-coding downstream 74110 15865748 ~ 15865986 (-)
G52793 NA non-coding downstream 76391 15859523 ~ 15863705 (-)
G52831 NA non-coding upstream 4496 15944798 ~ 15950331 (-)
G52866 NA non-coding upstream 184661 16124963 ~ 16126267 (-)
G52873 NA non-coding upstream 188979 16129281 ~ 16130351 (-)
G52915 NA non-coding upstream 268563 16208865 ~ 16215015 (-)
G52918 NA non-coding upstream 298456 16238758 ~ 16254139 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other downstream 88286 15834040 ~ 15851810 (-)
G52782 NA other downstream 102295 15836989 ~ 15837801 (-)
AMCG00008957 NA other downstream 300966 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 434579 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 882890 15032347 ~ 15057206 (-)
G52834 NA other upstream 17365 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 123252 16063554 ~ 16073935 (-)
G52951 NA other upstream 464408 16404710 ~ 16405126 (-)
G53017 NA other upstream 672922 16613224 ~ 16614461 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other upstream 883493 16823795 ~ 16913299 (-)

Expression


Co-expression Network