G52863


Basic Information

Item Value
gene id G52863
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16098240 ~ 16098446 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66185
aatccttttaatccctgttagatagcacttcacagagttttattatgcttcttgcgtttttgattgttttcctccttgctccctttcccgtagcccctgactgtgaccctacatcttgacagcacttagcttttaccgtccaggatgtatgacctcacttactgtacttgcctgtgtaaattggaagttgtaaaatgtattatattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66185 True 207 lncRNA 0.40 1 16098240 16098446

Neighbor

gene id symbol gene type direction distance location
AMCG00008969 ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 coding upstream 43715 16052549 ~ 16054525 (+)
AMCG00008970 NA coding upstream 105690 15992113 ~ 15992550 (+)
AMCG00008966 NA coding upstream 147215 15943157 ~ 15951025 (+)
AMCG00008967 NA coding upstream 166261 15931316 ~ 15931979 (+)
AMCG00008954 NA coding upstream 447967 15641691 ~ 15650273 (+)
AMCG00008972 NA coding downstream 27695 16126141 ~ 16134060 (+)
AMCG00008978 LOC108432681,LOC102199411,LOC102296518 coding downstream 332371 16430817 ~ 16451251 (+)
AMCG00008981 NA coding downstream 449171 16547617 ~ 16558958 (+)
AMCG00008979 NA coding downstream 462576 16561022 ~ 16564235 (+)
AMCG00008982 NA coding downstream 501214 16599660 ~ 16602244 (+)
G52861 NA non-coding upstream 12397 16085528 ~ 16085843 (+)
G52856 NA non-coding upstream 34526 16061840 ~ 16063714 (+)
G52817 NA non-coding upstream 142868 15953048 ~ 15955372 (+)
G52798 NA non-coding upstream 202821 15880057 ~ 15895419 (+)
G52781 NA non-coding upstream 260431 15836985 ~ 15837809 (+)
G52877 NA non-coding downstream 110502 16208948 ~ 16210044 (+)
G52890 NA non-coding downstream 145091 16243537 ~ 16244943 (+)
G52896 NA non-coding downstream 212946 16311392 ~ 16319852 (+)
G52931 NA non-coding downstream 244570 16343016 ~ 16344076 (+)
G52933 NA non-coding downstream 245810 16344256 ~ 16344678 (+)
AMCG00008965 NA other upstream 188089 15895430 ~ 15910151 (+)
AMCG00008960 rps11,rs11 other upstream 234570 15856224 ~ 15863670 (+)
AMCG00008931 pp12c,LOC106564933 other upstream 1077394 14982573 ~ 15020846 (+)
AMCG00008919 zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 other upstream 1286483 14807297 ~ 14811757 (+)
AMCG00008920 NA other upstream 1303056 14783043 ~ 14795184 (+)
G52942 NA other downstream 263656 16362102 ~ 16362511 (+)
AMCG00008983 NA other downstream 481417 16579863 ~ 16587381 (+)
G53028 NA other downstream 574057 16672503 ~ 16673542 (+)
AMCG00008985 NA other downstream 581379 16679825 ~ 16726295 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other downstream 632943 16731389 ~ 16737499 (+)

Expression


Co-expression Network